| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896648
Identifier: 159896648
GI number: 159896648
Start: 147983
End: 149488
Strand: Reverse
Name: 159896648
Synonym: Haur_0115
Alternate gene names: NA
Gene position: 149488-147983 (Counterclockwise)
Preceding gene: 159896657
Following gene: 159896647
Centisome position: 2.36
GC content: 51.66
Gene sequence:
>1506_bases ATGCAAGAACAATTAGCTGATTTGAAGGAAAAAATTGGGGTTGCTCAAGATTTATCGTATGCTAGCGCTGTGTTAAATTG GGATCAAAGCACCTACATGCCCGCTGGCGGGGCCGAAGCTCGTGGTCGCCAAATGGCCACGCTCAGCCGCTTAGCCCACG AGCATTCCACCGCGCCCGAAGTTGGTCGCTTGCTTGAACAGCTCGTGCCGTGGGCCGAACAACAAGATCCTGAATCGGAC GACGCAGCCTTGGTCTTGGTGACCAAGCGCGATTATGACCAAGCGGTGCGCGTGCCCAGCGAGTTTATTGCTGAATTGTA TTCGCACGTCGCCAAAACCTATACCGCCTGGACCCAAGCTCGCCCCAACAACGACTTCGCTTCAGTCGCCCCATTACTCG AAAAAACCCTTGACCTCAGCCGCCGCTATGCTGAATTTTTCGGCCCCAGCGAACATATTGCCGATCCACTGATCGATATG GCTGATCAAGGCATGACGGTGGCAAAAATTCGTGAGATTTTTGGACCCTTGCGCGAACAACTCGTGCCATTGGTCAAAAC CATCACCGAGCAACCTGCCGCTGACGATAGCTGTTTGTTGCAACACTACCCCGAAGCTGAGCAATTGGCCTTTGGTGAAA GCCTCATTCGCGAAATTGGCTACGACTTCGAGCGCGGTCGCCAAGATAAAACCCACCATCCCTTCATGACCAAGTTCTCG ATTGGTGATGTGCGGATCACCACCCGCTTCCGTGAAAACGATTTGAGCGATGGCCTGTTTAGCACAATTCACGAAACTGG CCATGCCGTCTATGAGTTGGGCGTAAATCCAGCCTACGAAAATACCCCATTGGCAAGCGGAGCTTCGGCAGGAACCCACG AATCACAATCACGCTTGTGGGAAAATGTGGTTGGTCGCAGCCGCGCCTTCTGGCAATATGCCTATCCCAAAGCTCAGGCC GCTTTCCCCAATCAACTGGGCAAGGTCGATTTAGATACCTTCTATCGGGCGATTAACAAAGTGCAGCGCTCGTTGATTCG CACCGATTCAGACGAAGTGACCTACAACTTGCACGTTATGATTCGCTTCGATTTGGAATTGGCCTTGCTCGAAGGTAAAT TGGCAATTCGCGATTTGCCTGAAGCTTGGCACGAACGCTATCGCAGCGATTTGGGCATTACCGCACCCGATAATCGCGAT GGTGTGCTGCAAGATGTCCACTGGTATGGTGGGATTATCGGTGGCTCGTTCCAAGGCTACACGTTGGGCAATATCCTCAG CGCTCAAGTTTTTGATGCTGCTGTGCGAGCCAATCCCAATATACCAACTGAAATTAGCCAAGGCCAATTTGCCAACCTGC ACAATTGGCTGAAATCGAATATGTACGTTCATGGCCGCAAATATAGCGTACCAACCTTGATCCGCAAGGTTACAGGCCAA GACCTCAGCATTGAGCCGTATATTCGCTATCTCCGCACCAAATACGGCGAACTCTATTCGTTGTAA
Upstream 100 bases:
>100_bases CAATGCGTCAAACTGGTTCTCAGCTAGCGCTGAATTGAATTATAATGACTGAGCGAGTGTGCGCCGTTGCACAAGCGTAC CACCTGTGTAGGAGAACAGA
Downstream 100 bases:
>100_bases AATAAGCGTCTCGCACAGTAAACGTTTGTCGGGGTTGGTTGCACAAACCAGCCCCGCTTGAGAATTGTTCATGGGTGATT GCATGGATCGGTTGCTTTGG
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MQEQLADLKEKIGVAQDLSYASAVLNWDQSTYMPAGGAEARGRQMATLSRLAHEHSTAPEVGRLLEQLVPWAEQQDPESD DAALVLVTKRDYDQAVRVPSEFIAELYSHVAKTYTAWTQARPNNDFASVAPLLEKTLDLSRRYAEFFGPSEHIADPLIDM ADQGMTVAKIREIFGPLREQLVPLVKTITEQPAADDSCLLQHYPEAEQLAFGESLIREIGYDFERGRQDKTHHPFMTKFS IGDVRITTRFRENDLSDGLFSTIHETGHAVYELGVNPAYENTPLASGASAGTHESQSRLWENVVGRSRAFWQYAYPKAQA AFPNQLGKVDLDTFYRAINKVQRSLIRTDSDEVTYNLHVMIRFDLELALLEGKLAIRDLPEAWHERYRSDLGITAPDNRD GVLQDVHWYGGIIGGSFQGYTLGNILSAQVFDAAVRANPNIPTEISQGQFANLHNWLKSNMYVHGRKYSVPTLIRKVTGQ DLSIEPYIRYLRTKYGELYSL
Sequences:
>Translated_501_residues MQEQLADLKEKIGVAQDLSYASAVLNWDQSTYMPAGGAEARGRQMATLSRLAHEHSTAPEVGRLLEQLVPWAEQQDPESD DAALVLVTKRDYDQAVRVPSEFIAELYSHVAKTYTAWTQARPNNDFASVAPLLEKTLDLSRRYAEFFGPSEHIADPLIDM ADQGMTVAKIREIFGPLREQLVPLVKTITEQPAADDSCLLQHYPEAEQLAFGESLIREIGYDFERGRQDKTHHPFMTKFS IGDVRITTRFRENDLSDGLFSTIHETGHAVYELGVNPAYENTPLASGASAGTHESQSRLWENVVGRSRAFWQYAYPKAQA AFPNQLGKVDLDTFYRAINKVQRSLIRTDSDEVTYNLHVMIRFDLELALLEGKLAIRDLPEAWHERYRSDLGITAPDNRD GVLQDVHWYGGIIGGSFQGYTLGNILSAQVFDAAVRANPNIPTEISQGQFANLHNWLKSNMYVHGRKYSVPTLIRKVTGQ DLSIEPYIRYLRTKYGELYSL >Mature_501_residues MQEQLADLKEKIGVAQDLSYASAVLNWDQSTYMPAGGAEARGRQMATLSRLAHEHSTAPEVGRLLEQLVPWAEQQDPESD DAALVLVTKRDYDQAVRVPSEFIAELYSHVAKTYTAWTQARPNNDFASVAPLLEKTLDLSRRYAEFFGPSEHIADPLIDM ADQGMTVAKIREIFGPLREQLVPLVKTITEQPAADDSCLLQHYPEAEQLAFGESLIREIGYDFERGRQDKTHHPFMTKFS IGDVRITTRFRENDLSDGLFSTIHETGHAVYELGVNPAYENTPLASGASAGTHESQSRLWENVVGRSRAFWQYAYPKAQA AFPNQLGKVDLDTFYRAINKVQRSLIRTDSDEVTYNLHVMIRFDLELALLEGKLAIRDLPEAWHERYRSDLGITAPDNRD GVLQDVHWYGGIIGGSFQGYTLGNILSAQVFDAAVRANPNIPTEISQGQFANLHNWLKSNMYVHGRKYSVPTLIRKVTGQ DLSIEPYIRYLRTKYGELYSL
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 56515; Mature: 56515
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQLADLKEKIGVAQDLSYASAVLNWDQSTYMPAGGAEARGRQMATLSRLAHEHSTAPE CCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH VGRLLEQLVPWAEQQDPESDDAALVLVTKRDYDQAVRVPSEFIAELYSHVAKTYTAWTQA HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHC RPNNDFASVAPLLEKTLDLSRRYAEFFGPSEHIADPLIDMADQGMTVAKIREIFGPLREQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVPLVKTITEQPAADDSCLLQHYPEAEQLAFGESLIREIGYDFERGRQDKTHHPFMTKFS HHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEE IGDVRITTRFRENDLSDGLFSTIHETGHAVYELGVNPAYENTPLASGASAGTHESQSRLW CCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH ENVVGRSRAFWQYAYPKAQAAFPNQLGKVDLDTFYRAINKVQRSLIRTDSDEVTYNLHVM HHHHHCCHHHHHHCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE IRFDLELALLEGKLAIRDLPEAWHERYRSDLGITAPDNRDGVLQDVHWYGGIIGGSFQGY EEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEECCCCCCC TLGNILSAQVFDAAVRANPNIPTEISQGQFANLHNWLKSNMYVHGRKYSVPTLIRKVTGQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHCCC DLSIEPYIRYLRTKYGELYSL CCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQEQLADLKEKIGVAQDLSYASAVLNWDQSTYMPAGGAEARGRQMATLSRLAHEHSTAPE CCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH VGRLLEQLVPWAEQQDPESDDAALVLVTKRDYDQAVRVPSEFIAELYSHVAKTYTAWTQA HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHC RPNNDFASVAPLLEKTLDLSRRYAEFFGPSEHIADPLIDMADQGMTVAKIREIFGPLREQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LVPLVKTITEQPAADDSCLLQHYPEAEQLAFGESLIREIGYDFERGRQDKTHHPFMTKFS HHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEE IGDVRITTRFRENDLSDGLFSTIHETGHAVYELGVNPAYENTPLASGASAGTHESQSRLW CCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH ENVVGRSRAFWQYAYPKAQAAFPNQLGKVDLDTFYRAINKVQRSLIRTDSDEVTYNLHVM HHHHHCCHHHHHHCCCCHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE IRFDLELALLEGKLAIRDLPEAWHERYRSDLGITAPDNRDGVLQDVHWYGGIIGGSFQGY EEECCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCEECCCCCCC TLGNILSAQVFDAAVRANPNIPTEISQGQFANLHNWLKSNMYVHGRKYSVPTLIRKVTGQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHCCC DLSIEPYIRYLRTKYGELYSL CCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]