| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896646
Identifier: 159896646
GI number: 159896646
Start: 145408
End: 146697
Strand: Direct
Name: 159896646
Synonym: Haur_0113
Alternate gene names: NA
Gene position: 145408-146697 (Clockwise)
Preceding gene: 159896641
Following gene: 159896649
Centisome position: 2.29
GC content: 52.95
Gene sequence:
>1290_bases ATGCAACTTCAATCATCAGCGGTCACTGATAGCCTTAACACGCTGCAATTGCTCAATCGGGCAGCGACAATTCGTGGGGC TTCAGCTTGGGTTCAACGGACGGCGCAGGCACTTAGCGCCAAGCAATTGGCCGATAATCAATTGGTGGCAAGCTTGGGCT TTGGTTTATTACCGCAAAACCCTAGCCAACCCATGGATGATTTTTTGGCCGAACTAGGCAGCAGCGAGCCAAATCAATGG GTCGCTCAACTCCAACAACACCTGCTCGAACTGAGCGCGAGCGCTGGGCCGCTCACCAGCGAACGGCTGTGGCAGGCCTT GCGCAATGCTGGCATTTATAGCGAACTTGCGACCCAACAAGAACTTTTGGCGGCGATGCAACAACCAGATCAATTGTTGG CGCGGGTTTGCCAACACCTTGAGCATATGTGGCAACTTTGCTTGCAAGCTGAGTGGCAACAAGCCCAAACTGCAATCAGC CAACTCAATCGCCAGCTCCAAGCCCAAGTTCCCAATGAAGCCGCACTCAAAGGTTTTCGCCAAAGCTTGGGCTATGCAGT TAATCAAGAGTGGCAGCAATTGCAGGGACAACGCCAAATTGTACTGTTTGCCGCGACCCAAAATGGCAGCCTAACCACGT TTTTGGCTGATCGCCAGCGTTTGTGGGTTGGCATTGGTTTTGGCATCAGTAACGAGCTTCAGCCACGGGTGGTGAGTCGC AACGAGTTATTATTTCGCTTGCAAGCGCTAGCCGATGCCGCGCGGATTCAAATTATGGAGCTTTTGGCGCAGGGCGAATT GTCGGCTCAAGCAATTATTAGCCAAACCCAACTACCGCAATCGAGCGTTTCGCGCCATTTGAATATTTTGCGCAATGCTG GCTTTGTGCAGGAGCGGCGGGCGGGCGGCGCAACCAAGAGCTATCGCTTGGTCACAAGCCACATCGGGGCAACCTTGGCG GCGCTTGAGCAAACGCTCAATCAACCAAGCGCAAGCCCAAGTAGCTCAGCTCAATCAGCATCAGCAGTGCCAACCAGCAT TCAACGCTTTTTCAATCGTGAAGGGCGCATGGTTACTTGGCCTAGCAAACACATCGATCGGATTCCGATTTTGGAGTATT TTGCCCAGCAATTTGAGTTTGGCCGTGAATATAGCGAACGCGAAATTAACGAGCTGCTCAAGCCGCACACTGGCAGCGAT GTAGCCAACCTGCGCCGCTACTTGATCGATGTCAAACTGTTCGAGCGCGATGGGACTGGCTCGCGCTATTGGCGCAAAAA GGAAGAGTAG
Upstream 100 bases:
>100_bases TTAATTCAATATTGAAATCCATCGTAAGACTGATTTACATAGTTATTCAATATTTTATTATTCAATTATCCAATTATTGA ATAAATTAGTGAGAAATAAT
Downstream 100 bases:
>100_bases AGTGTTAACCGCGAAGAGCGCGAAGAGCGCTAAGTAATGTTAATATCTAACTCCTTCGTGTTCTTCGTGTTCTTCGTGGT GAAAAAATAAATTTGGAATC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MQLQSSAVTDSLNTLQLLNRAATIRGASAWVQRTAQALSAKQLADNQLVASLGFGLLPQNPSQPMDDFLAELGSSEPNQW VAQLQQHLLELSASAGPLTSERLWQALRNAGIYSELATQQELLAAMQQPDQLLARVCQHLEHMWQLCLQAEWQQAQTAIS QLNRQLQAQVPNEAALKGFRQSLGYAVNQEWQQLQGQRQIVLFAATQNGSLTTFLADRQRLWVGIGFGISNELQPRVVSR NELLFRLQALADAARIQIMELLAQGELSAQAIISQTQLPQSSVSRHLNILRNAGFVQERRAGGATKSYRLVTSHIGATLA ALEQTLNQPSASPSSSAQSASAVPTSIQRFFNREGRMVTWPSKHIDRIPILEYFAQQFEFGREYSEREINELLKPHTGSD VANLRRYLIDVKLFERDGTGSRYWRKKEE
Sequences:
>Translated_429_residues MQLQSSAVTDSLNTLQLLNRAATIRGASAWVQRTAQALSAKQLADNQLVASLGFGLLPQNPSQPMDDFLAELGSSEPNQW VAQLQQHLLELSASAGPLTSERLWQALRNAGIYSELATQQELLAAMQQPDQLLARVCQHLEHMWQLCLQAEWQQAQTAIS QLNRQLQAQVPNEAALKGFRQSLGYAVNQEWQQLQGQRQIVLFAATQNGSLTTFLADRQRLWVGIGFGISNELQPRVVSR NELLFRLQALADAARIQIMELLAQGELSAQAIISQTQLPQSSVSRHLNILRNAGFVQERRAGGATKSYRLVTSHIGATLA ALEQTLNQPSASPSSSAQSASAVPTSIQRFFNREGRMVTWPSKHIDRIPILEYFAQQFEFGREYSEREINELLKPHTGSD VANLRRYLIDVKLFERDGTGSRYWRKKEE >Mature_429_residues MQLQSSAVTDSLNTLQLLNRAATIRGASAWVQRTAQALSAKQLADNQLVASLGFGLLPQNPSQPMDDFLAELGSSEPNQW VAQLQQHLLELSASAGPLTSERLWQALRNAGIYSELATQQELLAAMQQPDQLLARVCQHLEHMWQLCLQAEWQQAQTAIS QLNRQLQAQVPNEAALKGFRQSLGYAVNQEWQQLQGQRQIVLFAATQNGSLTTFLADRQRLWVGIGFGISNELQPRVVSR NELLFRLQALADAARIQIMELLAQGELSAQAIISQTQLPQSSVSRHLNILRNAGFVQERRAGGATKSYRLVTSHIGATLA ALEQTLNQPSASPSSSAQSASAVPTSIQRFFNREGRMVTWPSKHIDRIPILEYFAQQFEFGREYSEREINELLKPHTGSD VANLRRYLIDVKLFERDGTGSRYWRKKEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47965; Mature: 47965
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQSSAVTDSLNTLQLLNRAATIRGASAWVQRTAQALSAKQLADNQLVASLGFGLLPQN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PSQPMDDFLAELGSSEPNQWVAQLQQHLLELSASAGPLTSERLWQALRNAGIYSELATQQ CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH ELLAAMQQPDQLLARVCQHLEHMWQLCLQAEWQQAQTAISQLNRQLQAQVPNEAALKGFR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QSLGYAVNQEWQQLQGQRQIVLFAATQNGSLTTFLADRQRLWVGIGFGISNELQPRVVSR HHHCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCHHHH NELLFRLQALADAARIQIMELLAQGELSAQAIISQTQLPQSSVSRHLNILRNAGFVQERR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH AGGATKSYRLVTSHIGATLAALEQTLNQPSASPSSSAQSASAVPTSIQRFFNREGRMVTW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEC PSKHIDRIPILEYFAQQFEFGREYSEREINELLKPHTGSDVANLRRYLIDVKLFERDGTG CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCC SRYWRKKEE CCCCCCCCC >Mature Secondary Structure MQLQSSAVTDSLNTLQLLNRAATIRGASAWVQRTAQALSAKQLADNQLVASLGFGLLPQN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PSQPMDDFLAELGSSEPNQWVAQLQQHLLELSASAGPLTSERLWQALRNAGIYSELATQQ CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH ELLAAMQQPDQLLARVCQHLEHMWQLCLQAEWQQAQTAISQLNRQLQAQVPNEAALKGFR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QSLGYAVNQEWQQLQGQRQIVLFAATQNGSLTTFLADRQRLWVGIGFGISNELQPRVVSR HHHCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCHHHH NELLFRLQALADAARIQIMELLAQGELSAQAIISQTQLPQSSVSRHLNILRNAGFVQERR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH AGGATKSYRLVTSHIGATLAALEQTLNQPSASPSSSAQSASAVPTSIQRFFNREGRMVTW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEC PSKHIDRIPILEYFAQQFEFGREYSEREINELLKPHTGSDVANLRRYLIDVKLFERDGTG CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCC SRYWRKKEE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA