| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is kynB [H]
Identifier: 159896592
GI number: 159896592
Start: 74258
End: 74899
Strand: Reverse
Name: kynB [H]
Synonym: Haur_0059
Alternate gene names: 159896592
Gene position: 74899-74258 (Counterclockwise)
Preceding gene: 159896593
Following gene: 159896591
Centisome position: 1.18
GC content: 51.71
Gene sequence:
>642_bases ATGGCCCACTTGATCGATATTAGCGTTCCGATTTCGCCAGCCCTGCCGGTTTGGGAAGGCGACCCGCCGATTGAACAAAA ACGCGCCGCCGATATGAACAAAGGCGATATTTGTAATGTAACCCGCCTTAACACTGGGGTGCATATTGGCACGCACGTTG ATGCACCGCTGCACTTTATCAACAACGATTTGGCAGTTGAAAGCTTGGAGCTTGATCGGTTTGTTGGTGATTGTTATGTA GTGGAATTGATTGGTACTGGGCCAATTACTGGTGCTGAACTGGCCGCCGCGAATGTGCCTAGCGATTGTACGCGTCTCTT GCTCAAAACCAGCAATTCGGCCTTTTGGCAAGAAGAACCCTTGCGTTTCCATCGCGATTTTCGCGCACTCGACAGTAGTG CGGCTCGTTGGGTGATTGAGCACGATTTGCGCTTGATTGCGATCGATTATCTTTCAATCGAGCCATTTGAAGCCGAGCCA GGCAACCCTACTCACTGTATTTTGCTCGGCGGTCGGGTGGCAATCTTAGAGGGCATCAATTTAACCGAGGTCGCGCCTGG CCCATACAATTTGCTCTGCTTGCCATTGAAAATTCTGGGCAGCGATGGTGCTCCAGCTCGGGCCGTGCTTCAACCACGCT AA
Upstream 100 bases:
>100_bases CCTGCTGGCTGCCTGCTATTTTAGAATCATTTTTGTGAGACAATGGAAGCAGCTATTCTAGAGGTATGTGCAGCATACCT TGCCGTTGAAGGAGCCACCC
Downstream 100 bases:
>100_bases TTGCGCTTGCTACAGCCAGTTTGTGGCAATCCTGGGAGTTTTACTATGTTGCATACCATTGATCTTGTGGTTGAGCCGGT AACCGATCCACGGATTACGC
Product: cyclase family protein
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAHLIDISVPISPALPVWEGDPPIEQKRAADMNKGDICNVTRLNTGVHIGTHVDAPLHFINNDLAVESLELDRFVGDCYV VELIGTGPITGAELAAANVPSDCTRLLLKTSNSAFWQEEPLRFHRDFRALDSSAARWVIEHDLRLIAIDYLSIEPFEAEP GNPTHCILLGGRVAILEGINLTEVAPGPYNLLCLPLKILGSDGAPARAVLQPR
Sequences:
>Translated_213_residues MAHLIDISVPISPALPVWEGDPPIEQKRAADMNKGDICNVTRLNTGVHIGTHVDAPLHFINNDLAVESLELDRFVGDCYV VELIGTGPITGAELAAANVPSDCTRLLLKTSNSAFWQEEPLRFHRDFRALDSSAARWVIEHDLRLIAIDYLSIEPFEAEP GNPTHCILLGGRVAILEGINLTEVAPGPYNLLCLPLKILGSDGAPARAVLQPR >Mature_212_residues AHLIDISVPISPALPVWEGDPPIEQKRAADMNKGDICNVTRLNTGVHIGTHVDAPLHFINNDLAVESLELDRFVGDCYVV ELIGTGPITGAELAAANVPSDCTRLLLKTSNSAFWQEEPLRFHRDFRALDSSAARWVIEHDLRLIAIDYLSIEPFEAEPG NPTHCILLGGRVAILEGINLTEVAPGPYNLLCLPLKILGSDGAPARAVLQPR
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 23166; Mature: 23035
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLIDISVPISPALPVWEGDPPIEQKRAADMNKGDICNVTRLNTGVHIGTHVDAPLHFI CCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCEEC NNDLAVESLELDRFVGDCYVVELIGTGPITGAELAAANVPSDCTRLLLKTSNSAFWQEEP CCCCEEEEEHHHHHCCCEEEEEEECCCCCCCCHHEECCCCHHHHHHHHHCCCCCCCCCCH LRFHRDFRALDSSAARWVIEHDLRLIAIDYLSIEPFEAEPGNPTHCILLGGRVAILEGIN HHHHHHHHHHHHHHHEEEEECCEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCC LTEVAPGPYNLLCLPLKILGSDGAPARAVLQPR EEEECCCCCEEEEEEEEEECCCCCCCEEEECCC >Mature Secondary Structure AHLIDISVPISPALPVWEGDPPIEQKRAADMNKGDICNVTRLNTGVHIGTHVDAPLHFI CEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEECCCCCCCEEC NNDLAVESLELDRFVGDCYVVELIGTGPITGAELAAANVPSDCTRLLLKTSNSAFWQEEP CCCCEEEEEHHHHHCCCEEEEEEECCCCCCCCHHEECCCCHHHHHHHHHCCCCCCCCCCH LRFHRDFRALDSSAARWVIEHDLRLIAIDYLSIEPFEAEPGNPTHCILLGGRVAILEGIN HHHHHHHHHHHHHHHEEEEECCEEEEEEEEEEECCCCCCCCCCCEEEEECCEEEEEECCC LTEVAPGPYNLLCLPLKILGSDGAPARAVLQPR EEEECCCCCEEEEEEEEEECCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA