| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896591
Identifier: 159896591
GI number: 159896591
Start: 73658
End: 74212
Strand: Reverse
Name: 159896591
Synonym: Haur_0058
Alternate gene names: NA
Gene position: 74212-73658 (Counterclockwise)
Preceding gene: 159896592
Following gene: 159896588
Centisome position: 1.17
GC content: 50.45
Gene sequence:
>555_bases ATGTTGCATACCATTGATCTTGTGGTTGAGCCGGTAACCGATCCACGGATTACGCTTGTTTTGCAAGCCTTGCGTGGTAT GTATCTCAATGGTGGCGTGATTTTTCGCAGTATTCGGCCAAATGATGCATCGGCGTATGATAGTTTGTTTGCCAATACGA ATCTCAATCCCAGCCACCTAATCTATCGGTTTCTCAGCCATCCCACGCTTAATCGCGAATTGCCCGAGCTAGGGTTACCT ACCGAAATTCCCTTTGACCTGCCGCTAACCTTTTATAGCGGCTACGAATATGAAGGCGCTTTGACCCATGCTTTGGTCAG CGGCGGAGCCTACACCAGCTCGCCATTTAGCGATGGCGATGCCCGCACAATGAGCAAAGTCTGTGTCGAGGCTATGTTGG GCGGCGAAATGGCTACCACCACGGTTTGCCGAATTGAAGGCCCATGGGCACCATGGTTTAATTCGAGCCAATGGGATCGG AGCTTCGCTACCTTTAACCATGGTCAGCGCCGCTGGACGCTCTTATGTTTGACTGATACCAAACATACTGCTTAA
Upstream 100 bases:
>100_bases GAAAATTCTGGGCAGCGATGGTGCTCCAGCTCGGGCCGTGCTTCAACCACGCTAATTGCGCTTGCTACAGCCAGTTTGTG GCAATCCTGGGAGTTTTACT
Downstream 100 bases:
>100_bases CTAAAGTGGCGGCTCAATCGAAACATTGAGCCGCCACTTCGTTTAATCATTCAGCTTTGAGCAATACAGGATGAACGTTC ATCCCTCATCCCTCATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLHTIDLVVEPVTDPRITLVLQALRGMYLNGGVIFRSIRPNDASAYDSLFANTNLNPSHLIYRFLSHPTLNRELPELGLP TEIPFDLPLTFYSGYEYEGALTHALVSGGAYTSSPFSDGDARTMSKVCVEAMLGGEMATTTVCRIEGPWAPWFNSSQWDR SFATFNHGQRRWTLLCLTDTKHTA
Sequences:
>Translated_184_residues MLHTIDLVVEPVTDPRITLVLQALRGMYLNGGVIFRSIRPNDASAYDSLFANTNLNPSHLIYRFLSHPTLNRELPELGLP TEIPFDLPLTFYSGYEYEGALTHALVSGGAYTSSPFSDGDARTMSKVCVEAMLGGEMATTTVCRIEGPWAPWFNSSQWDR SFATFNHGQRRWTLLCLTDTKHTA >Mature_184_residues MLHTIDLVVEPVTDPRITLVLQALRGMYLNGGVIFRSIRPNDASAYDSLFANTNLNPSHLIYRFLSHPTLNRELPELGLP TEIPFDLPLTFYSGYEYEGALTHALVSGGAYTSSPFSDGDARTMSKVCVEAMLGGEMATTTVCRIEGPWAPWFNSSQWDR SFATFNHGQRRWTLLCLTDTKHTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20531; Mature: 20531
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHTIDLVVEPVTDPRITLVLQALRGMYLNGGVIFRSIRPNDASAYDSLFANTNLNPSHL CCEEEEEEEECCCCCHHHHHHHHHHCEEECCCEEEEEECCCCCHHHHHHHHCCCCCHHHH IYRFLSHPTLNRELPELGLPTEIPFDLPLTFYSGYEYEGALTHALVSGGAYTSSPFSDGD HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCH ARTMSKVCVEAMLGGEMATTTVCRIEGPWAPWFNSSQWDRSFATFNHGQRRWTLLCLTDT HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEECC KHTA CCCC >Mature Secondary Structure MLHTIDLVVEPVTDPRITLVLQALRGMYLNGGVIFRSIRPNDASAYDSLFANTNLNPSHL CCEEEEEEEECCCCCHHHHHHHHHHCEEECCCEEEEEECCCCCHHHHHHHHCCCCCHHHH IYRFLSHPTLNRELPELGLPTEIPFDLPLTFYSGYEYEGALTHALVSGGAYTSSPFSDGD HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCH ARTMSKVCVEAMLGGEMATTTVCRIEGPWAPWFNSSQWDRSFATFNHGQRRWTLLCLTDT HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEECC KHTA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA