| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896588
Identifier: 159896588
GI number: 159896588
Start: 70791
End: 71075
Strand: Reverse
Name: 159896588
Synonym: Haur_0055
Alternate gene names: NA
Gene position: 71075-70791 (Counterclockwise)
Preceding gene: 159896591
Following gene: 159896576
Centisome position: 1.12
GC content: 54.04
Gene sequence:
>285_bases ATGGACCCGAAAACCTATATCCACACTCGCAGCCAACGCTTGGCTGCTAATGCGGCTGCCAAGGAACGCTTGCTGGATGA ACGAATTGCTCAGGTTGTTGCCGCTGCGCATGTCGCTGAGGCTGCTCGCTTAGTCGAAGTCTGCCCAGGTTGTAGGCAGG CTCCCTGCCAAACGCCACGCAGTTGTACGATTCGCTTACGGGCCATCACTCAACATCGTTTACGAGAAGCTGAATTGGCT GCCCTGTGGCCATCGAAGCACGAGTTGCAGATTAAATTAACCTAA
Upstream 100 bases:
>100_bases TCAACTACCTAATAGCTGCTAAAACGTACAGTATTGATCCTCAGCCAATTGATTATTGACTTCGCGAATGCCCCACAACG CTATGAAACGAGGATGATGA
Downstream 100 bases:
>100_bases ACCCTTGTGGTGCAAATGACCACAAATCAACTCAATGAGCGTTGGCGAATTAGCACTTCATCAAGCTCATTGATCAGGGT TGGGAGTTCGACCAAGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MDPKTYIHTRSQRLAANAAAKERLLDERIAQVVAAAHVAEAARLVEVCPGCRQAPCQTPRSCTIRLRAITQHRLREAELA ALWPSKHELQIKLT
Sequences:
>Translated_94_residues MDPKTYIHTRSQRLAANAAAKERLLDERIAQVVAAAHVAEAARLVEVCPGCRQAPCQTPRSCTIRLRAITQHRLREAELA ALWPSKHELQIKLT >Mature_94_residues MDPKTYIHTRSQRLAANAAAKERLLDERIAQVVAAAHVAEAARLVEVCPGCRQAPCQTPRSCTIRLRAITQHRLREAELA ALWPSKHELQIKLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10519; Mature: 10519
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPKTYIHTRSQRLAANAAAKERLLDERIAQVVAAAHVAEAARLVEVCPGCRQAPCQTPR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SCTIRLRAITQHRLREAELAALWPSKHELQIKLT CCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MDPKTYIHTRSQRLAANAAAKERLLDERIAQVVAAAHVAEAARLVEVCPGCRQAPCQTPR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SCTIRLRAITQHRLREAELAALWPSKHELQIKLT CCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA