| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896581
Identifier: 159896581
GI number: 159896581
Start: 63851
End: 64852
Strand: Direct
Name: 159896581
Synonym: Haur_0048
Alternate gene names: NA
Gene position: 63851-64852 (Clockwise)
Preceding gene: 159896580
Following gene: 159896582
Centisome position: 1.01
GC content: 50.4
Gene sequence:
>1002_bases ATGACAACCATGACAGTGCGTTTTTGGGGTGTGCGTGGCAGCCACCCAGTATCCGGCCCAGAATATTTGAAGTACGGCGG CAACACGTTATGCGTCGAGGTCGAGGCCAATGGCCATACGATTATCCTCGATGCTGGAACTGGCATTATTAACCTTGGCA AAAGCCTGAATGCTCGCGCCAAAGCCAGTGGTAAGCCCATCGATGTGACAATTTTGTTCAGCCATATGCACCATGATCAT ACCCAGGGTTTTCCATTTTTCACCCCTGCCTATCGTGGTGACACCAATATGCACATCTTTGGGCCTGGTATTTTTGAACG TGATTTAGAAGAAACCTTAGCAAAAACGATGTTGCCGCCGGTTTTTCCTGTGTCGATGGCCGAATTGCCTGCCCAAAAAA TCGTTTCGAGCATCCGCGAAACTGATGTATTATTGCTTTCAGAGGCGGTGGGCGGCGCGATGCTGCGCAATCGTTTTCAC GATAATCTGAGCGATATCGATGAGAATATGATTGTGATCAAGGCCTTGCGCTCATATGCACACCCCGATGGCGTGTTAGT TTACCGCATTGAATGGCAAGGAATGAGCGTTGTCTACGCCACTGACACAGAAGGCTATATTAATGGTGATCAACGGCTAG CTCAATTTGCTCAAGGTGCTGATGTGCTGATCCACGATGCTCAATATACCGAGGAGCATTATCTGGGCAAAGCACCAGGC TTTGGTTCAACCCAAGGCTGGGGTCACTCAACCGCCACGATGGCGTGTGATGTGGCCAAATCGGCCAAAGTCGGCACATT AGTTTTGTTCCATCACGAGCCAACCTATGGCGATGATGTGATCGAGACAATTGAAAACCATGCCAAATCGATGTTTGCTG GAGCAGTCGCTGCCCGCGAAGGCTTAGAATTGGTGCTGAACCAACCGCAACCTGAAGTAGCCAGCGTCGCGGATGCCAGC ACTGCCGTAACCGAGCCATTGAGCAGCGACGTTGCAAGTTGA
Upstream 100 bases:
>100_bases GTTGGGCAAGTGTGAGCTAGCTAACAGCCGCTTGTTTGCGAATTGGGCATAATAGAACCACGATACATCAAACCCACGTC AACCCAGAAGGAGACAACCA
Downstream 100 bases:
>100_bases TCAACGGTAGCAGGTGGAGGAACACGCCCATGAATCCAACCATCACAACGATTACTCCGAGTTTTGGCTGGCGCATGCTA GGAGATAGCCCAATGTTGAG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Superfamily Protein; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; Conserved Beta-Lactamase Domain Protein; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTTMTVRFWGVRGSHPVSGPEYLKYGGNTLCVEVEANGHTIILDAGTGIINLGKSLNARAKASGKPIDVTILFSHMHHDH TQGFPFFTPAYRGDTNMHIFGPGIFERDLEETLAKTMLPPVFPVSMAELPAQKIVSSIRETDVLLLSEAVGGAMLRNRFH DNLSDIDENMIVIKALRSYAHPDGVLVYRIEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPG FGSTQGWGHSTATMACDVAKSAKVGTLVLFHHEPTYGDDVIETIENHAKSMFAGAVAAREGLELVLNQPQPEVASVADAS TAVTEPLSSDVAS
Sequences:
>Translated_333_residues MTTMTVRFWGVRGSHPVSGPEYLKYGGNTLCVEVEANGHTIILDAGTGIINLGKSLNARAKASGKPIDVTILFSHMHHDH TQGFPFFTPAYRGDTNMHIFGPGIFERDLEETLAKTMLPPVFPVSMAELPAQKIVSSIRETDVLLLSEAVGGAMLRNRFH DNLSDIDENMIVIKALRSYAHPDGVLVYRIEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPG FGSTQGWGHSTATMACDVAKSAKVGTLVLFHHEPTYGDDVIETIENHAKSMFAGAVAAREGLELVLNQPQPEVASVADAS TAVTEPLSSDVAS >Mature_332_residues TTMTVRFWGVRGSHPVSGPEYLKYGGNTLCVEVEANGHTIILDAGTGIINLGKSLNARAKASGKPIDVTILFSHMHHDHT QGFPFFTPAYRGDTNMHIFGPGIFERDLEETLAKTMLPPVFPVSMAELPAQKIVSSIRETDVLLLSEAVGGAMLRNRFHD NLSDIDENMIVIKALRSYAHPDGVLVYRIEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPGF GSTQGWGHSTATMACDVAKSAKVGTLVLFHHEPTYGDDVIETIENHAKSMFAGAVAAREGLELVLNQPQPEVASVADAST AVTEPLSSDVAS
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36069; Mature: 35938
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMTVRFWGVRGSHPVSGPEYLKYGGNTLCVEVEANGHTIILDAGTGIINLGKSLNARA CCEEEEEEEECCCCCCCCCCHHHEECCCEEEEEEECCCCEEEEECCCCEEECCCCCCCCC KASGKPIDVTILFSHMHHDHTQGFPFFTPAYRGDTNMHIFGPGIFERDLEETLAKTMLPP CCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC VFPVSMAELPAQKIVSSIRETDVLLLSEAVGGAMLRNRFHDNLSDIDENMIVIKALRSYA CCCCHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHC HPDGVLVYRIEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPG CCCCEEEEEEEECCEEEEEEECCCCEECHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCC FGSTQGWGHSTATMACDVAKSAKVGTLVLFHHEPTYGDDVIETIENHAKSMFAGAVAARE CCCCCCCCCCHHHEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC GLELVLNQPQPEVASVADASTAVTEPLSSDVAS CHHEEECCCCCHHHHHHCCHHHHHCCHHHHCCC >Mature Secondary Structure TTMTVRFWGVRGSHPVSGPEYLKYGGNTLCVEVEANGHTIILDAGTGIINLGKSLNARA CEEEEEEEECCCCCCCCCCHHHEECCCEEEEEEECCCCEEEEECCCCEEECCCCCCCCC KASGKPIDVTILFSHMHHDHTQGFPFFTPAYRGDTNMHIFGPGIFERDLEETLAKTMLPP CCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC VFPVSMAELPAQKIVSSIRETDVLLLSEAVGGAMLRNRFHDNLSDIDENMIVIKALRSYA CCCCHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHC HPDGVLVYRIEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPG CCCCEEEEEEEECCEEEEEEECCCCEECHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCC FGSTQGWGHSTATMACDVAKSAKVGTLVLFHHEPTYGDDVIETIENHAKSMFAGAVAARE CCCCCCCCCCHHHEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC GLELVLNQPQPEVASVADASTAVTEPLSSDVAS CHHEEECCCCCHHHHHHCCHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA