Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896569

Identifier: 159896569

GI number: 159896569

Start: 44387

End: 44965

Strand: Direct

Name: 159896569

Synonym: Haur_0036

Alternate gene names: NA

Gene position: 44387-44965 (Clockwise)

Preceding gene: 159896568

Following gene: 159896570

Centisome position: 0.7

GC content: 46.98

Gene sequence:

>579_bases
GTGGATGGCGAGTGTATGAGTGCCGAATCAATTAGCCCAATGACAATTGAGGAATATTTGGCTGGTGAGCGAACCAGCCC
TGCTAAACATGAATTTCTGAATGGGCAGGTTTATGCCTTGGCTGGCGCGAGTCGCAACCATAATTTGATTGTGGCCAATT
TGATTGCCGAATTGCATAGCCAGTTAAAGCAGCGTTCTTGCACAGTTTTCCCCAGCGATCTCCGCATCAAAATTTCGGCT
ACAGGCTTGTATACCTATCCTGATGTCTCGGTTGTGCATGGCGAAACCTGGTTTGACGATAGCCATCAAGATACCTTGCT
TAACCCCACGCTGATTATTGAAGTGCTTTCGCCCTCAACCGAGCACTACGATCGTGGGGGGAAATTTCAGCATTATCGTC
AAATTCCCTCGCTGCGTGAATACCTGTTAGTTGCCCAAGATCCCTACCATATTGAGCACTACAGTCGTCAGGCAGCCAAT
CAATGGCTCTTAAGCGAAATCGATGATCCACAAGTAGTGCTGGAGTTACGCTCAATTCAGTGTAGACTGACGGTTCAAGA
AGTTTATGCCAAAATATAG

Upstream 100 bases:

>100_bases
AACCTTCGTGTAACTTCGTGTTCTTCGTGGATCAAGCCTTCCGCTCCCCAGCAACCAACCCTCAAAGCCATGTGCTATGA
TGCAAGGGCGATTGAATTTA

Downstream 100 bases:

>100_bases
TGTAAAGTCAGAAGGCAAAAGTCAAAAATCAAAAGAGTCAAGGATATTTCAGGGGTCAGGTTTGTAAAGCAGAGGCACAG
AGAAACTATGGCTATTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDGECMSAESISPMTIEEYLAGERTSPAKHEFLNGQVYALAGASRNHNLIVANLIAELHSQLKQRSCTVFPSDLRIKISA
TGLYTYPDVSVVHGETWFDDSHQDTLLNPTLIIEVLSPSTEHYDRGGKFQHYRQIPSLREYLLVAQDPYHIEHYSRQAAN
QWLLSEIDDPQVVLELRSIQCRLTVQEVYAKI

Sequences:

>Translated_192_residues
MDGECMSAESISPMTIEEYLAGERTSPAKHEFLNGQVYALAGASRNHNLIVANLIAELHSQLKQRSCTVFPSDLRIKISA
TGLYTYPDVSVVHGETWFDDSHQDTLLNPTLIIEVLSPSTEHYDRGGKFQHYRQIPSLREYLLVAQDPYHIEHYSRQAAN
QWLLSEIDDPQVVLELRSIQCRLTVQEVYAKI
>Mature_192_residues
MDGECMSAESISPMTIEEYLAGERTSPAKHEFLNGQVYALAGASRNHNLIVANLIAELHSQLKQRSCTVFPSDLRIKISA
TGLYTYPDVSVVHGETWFDDSHQDTLLNPTLIIEVLSPSTEHYDRGGKFQHYRQIPSLREYLLVAQDPYHIEHYSRQAAN
QWLLSEIDDPQVVLELRSIQCRLTVQEVYAKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1290 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 21844; Mature: 21844

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGECMSAESISPMTIEEYLAGERTSPAKHEFLNGQVYALAGASRNHNLIVANLIAELHS
CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHH
QLKQRSCTVFPSDLRIKISATGLYTYPDVSVVHGETWFDDSHQDTLLNPTLIIEVLSPST
HHHHCCCCCCCCCEEEEEEECEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
EHYDRGGKFQHYRQIPSLREYLLVAQDPYHIEHYSRQAANQWLLSEIDDPQVVLELRSIQ
HHHCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCE
CRLTVQEVYAKI
EEEEHHHHHHCC
>Mature Secondary Structure
MDGECMSAESISPMTIEEYLAGERTSPAKHEFLNGQVYALAGASRNHNLIVANLIAELHS
CCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHH
QLKQRSCTVFPSDLRIKISATGLYTYPDVSVVHGETWFDDSHQDTLLNPTLIIEVLSPST
HHHHCCCCCCCCCEEEEEEECEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
EHYDRGGKFQHYRQIPSLREYLLVAQDPYHIEHYSRQAANQWLLSEIDDPQVVLELRSIQ
HHHCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEHHCE
CRLTVQEVYAKI
EEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]