| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896568
Identifier: 159896568
GI number: 159896568
Start: 43726
End: 44142
Strand: Direct
Name: 159896568
Synonym: Haur_0035
Alternate gene names: NA
Gene position: 43726-44142 (Clockwise)
Preceding gene: 159896567
Following gene: 159896569
Centisome position: 0.69
GC content: 54.68
Gene sequence:
>417_bases ATGACTGCTCAGTTAACCGTTGGCGATACCATGAACGCAGAAGTAATCTCCTGTCGAACCGAAACCAGCCTCCGCGAGGC AATCACGCTCCTACAAGGCAACCGCATTCAAGCCTTGGTGGTGGTTGATGGCCCTGGTTCTTTAGCGGGCGTTTTTTCGC AAACCGATGCCCTTGGTGCTTGGAGTCGTGGCCTCGATTATGAGCGCTCGATGGACAGCCCAGTTGGCGAGTTTATGACC CGCGATGTTATTACCTGTATGCCCCATGTTGATCTGAGCCGTGCCGCGAATCTGCTGACCAGCAACCGAATTCATCGCTT GGTCGTGGTTGAGGAGCGCAACGATGGCCGCGTTTGGCCGATCGGCGTGCTCTCACAAACCGATATTGTGCGCAAATTGG GTGAAGAAGGCCACTAA
Upstream 100 bases:
>100_bases GAAAATTCGCTAAAAAAGTACTTGATAATGCAATGCGTCATGCTATAATAGCCAACAATCGAACCTCGGCCAAACCTCAG AAATGCAAAGGAGCATGGCA
Downstream 100 bases:
>100_bases ACTAGGTCAAAAGTCAAAAGTCAAAAGTCAGAACATTAGACGAGAGGCATGCAGGAGAGATTAGGAACCACATTTTTAAC CGCAAAGAGCACGAAGGATC
Product: signal-transduction protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Crotonyl-CoA Reductase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTAQLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGAWSRGLDYERSMDSPVGEFMT RDVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWPIGVLSQTDIVRKLGEEGH
Sequences:
>Translated_138_residues MTAQLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGAWSRGLDYERSMDSPVGEFMT RDVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWPIGVLSQTDIVRKLGEEGH >Mature_137_residues TAQLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGAWSRGLDYERSMDSPVGEFMTR DVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWPIGVLSQTDIVRKLGEEGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15092; Mature: 14961
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGA CCCEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHCCCCCHH WSRGLDYERSMDSPVGEFMTRDVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWP HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEEE IGVLSQTDIVRKLGEEGH EECCCHHHHHHHHCCCCC >Mature Secondary Structure TAQLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGA CCEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHCCCCCHH WSRGLDYERSMDSPVGEFMTRDVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWP HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEEE IGVLSQTDIVRKLGEEGH EECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA