| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896567
Identifier: 159896567
GI number: 159896567
Start: 42959
End: 43624
Strand: Direct
Name: 159896567
Synonym: Haur_0034
Alternate gene names: NA
Gene position: 42959-43624 (Clockwise)
Preceding gene: 159896566
Following gene: 159896568
Centisome position: 0.68
GC content: 50.0
Gene sequence:
>666_bases ATGGAACCAAACCTCTTAAATGTGAGCAGCAGTTATCGCCAGCTGATTGACGCTAATCGAGCGGAAATAACCGTGCGGAT CAAAGGCTCGTCGGTGATTAGCAACAATACCGCCTTGGAAAAAGCCAAGGAAGTGCGCCAGTTGGTCGAAGCCTTGACCA GCTATGGCTTGGACAAGACGGCCATCCAACTCCAAAGCGTGGTGGCTGAGGTGAATAATGGCGTGTTGCTGCGCAGTTCG AGTGCCACCTATAGCCTCTTAATTCGCTGCACCGATTTAGAGCAACTGCCCGATGTGCTTGGCATTATCACCAGCCAAAA ACAAGCCAATCTCGAACATGTTACGTGGGGCTTTCCCGATGATCCAGCAATCTTGAATGGATGGCTACAAGCTGCCTTAG AATTAGCCAAAGCCAAGGCCAAAGCAATGGCGCAAACTCTTGGCGTGCGGATTATCGGCGTGCATCGGGTTGATGATCAA TATGGCAGTGAACACCATCCGTATGCCCAAGATGGCGAGTTTCGTAAATCGGCTAGCTTCATGCGCAGTGGCGGTAGCGG AATTAGCAAAGACGATTTGGGCCTTGCCATGATCCATCGCAAACAGATCGAAGTCAATGTCCAGGTTGCTTTTATCATCA GCCCAGATGAGAATTTTACGATCTAG
Upstream 100 bases:
>100_bases CAATCCGTGCAATCTGTGGCTAAATATACCCTTCGCGTGCTTCGCGGTTTCAACCCTTCGTGTCCTTCGTGTCCTTCGTG GATCAATCAAGGAGCCGTTT
Downstream 100 bases:
>100_bases CGAAAATTCGCTAAAAAAGTACTTGATAATGCAATGCGTCATGCTATAATAGCCAACAATCGAACCTCGGCCAAACCTCA GAAATGCAAAGGAGCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEPNLLNVSSSYRQLIDANRAEITVRIKGSSVISNNTALEKAKEVRQLVEALTSYGLDKTAIQLQSVVAEVNNGVLLRSS SATYSLLIRCTDLEQLPDVLGIITSQKQANLEHVTWGFPDDPAILNGWLQAALELAKAKAKAMAQTLGVRIIGVHRVDDQ YGSEHHPYAQDGEFRKSASFMRSGGSGISKDDLGLAMIHRKQIEVNVQVAFIISPDENFTI
Sequences:
>Translated_221_residues MEPNLLNVSSSYRQLIDANRAEITVRIKGSSVISNNTALEKAKEVRQLVEALTSYGLDKTAIQLQSVVAEVNNGVLLRSS SATYSLLIRCTDLEQLPDVLGIITSQKQANLEHVTWGFPDDPAILNGWLQAALELAKAKAKAMAQTLGVRIIGVHRVDDQ YGSEHHPYAQDGEFRKSASFMRSGGSGISKDDLGLAMIHRKQIEVNVQVAFIISPDENFTI >Mature_221_residues MEPNLLNVSSSYRQLIDANRAEITVRIKGSSVISNNTALEKAKEVRQLVEALTSYGLDKTAIQLQSVVAEVNNGVLLRSS SATYSLLIRCTDLEQLPDVLGIITSQKQANLEHVTWGFPDDPAILNGWLQAALELAKAKAKAMAQTLGVRIIGVHRVDDQ YGSEHHPYAQDGEFRKSASFMRSGGSGISKDDLGLAMIHRKQIEVNVQVAFIISPDENFTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24203; Mature: 24203
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNLLNVSSSYRQLIDANRAEITVRIKGSSVISNNTALEKAKEVRQLVEALTSYGLDKT CCCCEECCHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCHH AIQLQSVVAEVNNGVLLRSSSATYSLLIRCTDLEQLPDVLGIITSQKQANLEHVTWGFPD HHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCC DPAILNGWLQAALELAKAKAKAMAQTLGVRIIGVHRVDDQYGSEHHPYAQDGEFRKSASF CHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHCCCCCCCCCCCCCHHHHHHH MRSGGSGISKDDLGLAMIHRKQIEVNVQVAFIISPDENFTI HHCCCCCCCCCCCCCEEEEHEEEEEEEEEEEEECCCCCCCC >Mature Secondary Structure MEPNLLNVSSSYRQLIDANRAEITVRIKGSSVISNNTALEKAKEVRQLVEALTSYGLDKT CCCCEECCHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCHH AIQLQSVVAEVNNGVLLRSSSATYSLLIRCTDLEQLPDVLGIITSQKQANLEHVTWGFPD HHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCC DPAILNGWLQAALELAKAKAKAMAQTLGVRIIGVHRVDDQYGSEHHPYAQDGEFRKSASF CHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCHHCCCCCCCCCCCCCHHHHHHH MRSGGSGISKDDLGLAMIHRKQIEVNVQVAFIISPDENFTI HHCCCCCCCCCCCCCEEEEHEEEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA