| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041956
Identifier: 159041956
GI number: 159041956
Start: 1469888
End: 1471861
Strand: Reverse
Name: 159041956
Synonym: Cmaq_1392
Alternate gene names: NA
Gene position: 1471861-1469888 (Counterclockwise)
Preceding gene: 159041958
Following gene: 159041955
Centisome position: 70.85
GC content: 49.19
Gene sequence:
>1974_bases ATGGGTTGTATGGTTATTGTTGCTGTTGATGTTGGTGGTACTTTTACGGATTTCGTTACTTTAAGTGATGACGGTTCAAT AGAATCCTTTAAGGTTCTTAGTACACCTAGGAATCCTGAGGCAGCAGTATTAGGGGGTCTTAGGAGGATTAATGCCCGTA TTGATGAGGTCCTGCATGCAACCACAATTGGGACAAATGCCCTATTGGGTCAGGTGGGTCTTGAGTTGCCTAAGGTTGCC TTATTCACCACTAAGGGTTTTAGGGATGTTATTGAGATTGGGCGTCAGAATAGGCCTAGGCTCTATGACTTATTCTTCGA GAAGCCTAAGCCCCTTGTACCCAGGGAGCTTAGGTTTGAGATTGAGGAGAGGACGTTAGCTAACGGTGAGGTGGTTAAGG AGGTTAACCCACGTGAGGTTGAGGAGTATGCTGTTAAGGCTAAGTCCCTTGGCGTAAACTCAGTTGCAGTATCTTACCTG CACTCATACATTAATCCACGTAATGAGGAGATTACAGGCAGTGTATTAGGCAGGTACTTTAACTACGTAGCCTTATCAAG TAAAATTGCCCCAGAGCCTAGGGAGTATGAAAGAACCTCCACAGCGGTCGTTAATGCTGCCTTAATGCCCATTGTTAGCC AGTACATTAATGAGTTTTCCAAGGGCCTTAGGGAGCTGGGTATTGATAAGTTCTTCATAATGTCCAGTTCAGGAGGCCTA GTGGATAGTGATGAAGCCACTCAGAGGCCTGTTCAATTAATTGAATCAGGCCCAGCAGCCGGCGCCGTGGCCGCTGCGGA ATTCTCAAGGATTATTAGTGTTAGGAATGTTATTGGATTCGACATGGGTGGGACCACGGCGAAGGCATCATCCATAGTTA ACCATGAACCCGAGGTAACCACGGAGTATGAGGTCGGCGGTGAGGTTCACCATGGGAGACTAGTTAAGGGCAGCGGTTAC CCGGTGAGATTCCCATTCATAGACCTTGCTGAAGTATCCTCAGGTGGTGGTACAATTATTTGGCGTGATGAAGCCGGCGC CTTAAGGGTTGGGCCATTGAGCGCGGGTGCTGATCCTGGGCCAATATGCTACGATAAGGGTGGTGTGGAGCCAACGCTCA CTGATGCTAACCTAGCCCTAGGTAGAATTGGGGATTACCTCCTTGGTGGTGAAATGAAGCTGAATAAGGAAGGCGCCATC AAAGGGCTGCGTAGACTGGGTGATCCAATTGATGTTGCTCTCAACGCCATTAAACTCGCTAATATTGAGATGGCCAGGGC AGTGAGGCTTGTTACAGTGGAGAGGGGGCTTAATCCAGGGGATTTTGCATTAATGGCATTCGGTGGTGCTGGTCCCCAGC ACTCTGCTGAGATTGCTGAGGAATTAGGGGTAAGCACCATTATTGTGCCACCGGAGCCTGGTGCTTTTTCCGCTCTTGGT TTATTAATGGCTGATGAGAAGTTTGAGGTGAGGATGTCGTATCCAAGGGATTTAGAGGAGGGTTTTATGAAGCTGGAGGA TGAGTTAAGCCAGAGGCTTGGCAAGGTGTCTTACTTCCTCAGGTACGCTGACGTTAGGTACAGGGGGCAGGGCTGGGAAT TAACCATACCAGTGAATAGGCCTGCTAGGATTGAGGACGTGGAGAGGACCTTTAATGATAAGCACCAGGCAACCTACGGG TTTAGGTTGAGTAAGCCTATTGAGGTTGTTACCATAAGGGTCTTCGCGGTGGTAACAAGGTTGAAGCCTAGGTTCAAGGT GAAGAACCTGGGGGGTGAGGCTAAGCCAAGGGGCTTTAGGAGAGTCTTCTTTAATGAGTGGGTTGAAGCACCCGTTTACT GGCGTGGCGACATACCCATGGGGCAGGTGATTGAGGGACCAGCCGTAATTGAGGAGTATGGTTCAACAATAGTGGTGCCG CCTAGGTGGAGGGCTGAGGTTGGTGGGAATGCGGAGGTGATTATGAGGAGGTGA
Upstream 100 bases:
>100_bases GAAACCCATGTTAGTATATAACGGTACTCCTGGTGATAGTACTTCCCACTTATGCATTTTATTGATGTGAGGGAAAAAGA TATAAACTTATTGCGTCTCC
Downstream 100 bases:
>100_bases CGCCATGGTATCCTGGGAAATAATCTACAGGGCATCAGTATTCATAGCTGAGGAAATGGGTGTGGCATTGAAGCGCTCGG CCTTTTCCCCAAATATCCGT
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MGCMVIVAVDVGGTFTDFVTLSDDGSIESFKVLSTPRNPEAAVLGGLRRINARIDEVLHATTIGTNALLGQVGLELPKVA LFTTKGFRDVIEIGRQNRPRLYDLFFEKPKPLVPRELRFEIEERTLANGEVVKEVNPREVEEYAVKAKSLGVNSVAVSYL HSYINPRNEEITGSVLGRYFNYVALSSKIAPEPREYERTSTAVVNAALMPIVSQYINEFSKGLRELGIDKFFIMSSSGGL VDSDEATQRPVQLIESGPAAGAVAAAEFSRIISVRNVIGFDMGGTTAKASSIVNHEPEVTTEYEVGGEVHHGRLVKGSGY PVRFPFIDLAEVSSGGGTIIWRDEAGALRVGPLSAGADPGPICYDKGGVEPTLTDANLALGRIGDYLLGGEMKLNKEGAI KGLRRLGDPIDVALNAIKLANIEMARAVRLVTVERGLNPGDFALMAFGGAGPQHSAEIAEELGVSTIIVPPEPGAFSALG LLMADEKFEVRMSYPRDLEEGFMKLEDELSQRLGKVSYFLRYADVRYRGQGWELTIPVNRPARIEDVERTFNDKHQATYG FRLSKPIEVVTIRVFAVVTRLKPRFKVKNLGGEAKPRGFRRVFFNEWVEAPVYWRGDIPMGQVIEGPAVIEEYGSTIVVP PRWRAEVGGNAEVIMRR
Sequences:
>Translated_657_residues MGCMVIVAVDVGGTFTDFVTLSDDGSIESFKVLSTPRNPEAAVLGGLRRINARIDEVLHATTIGTNALLGQVGLELPKVA LFTTKGFRDVIEIGRQNRPRLYDLFFEKPKPLVPRELRFEIEERTLANGEVVKEVNPREVEEYAVKAKSLGVNSVAVSYL HSYINPRNEEITGSVLGRYFNYVALSSKIAPEPREYERTSTAVVNAALMPIVSQYINEFSKGLRELGIDKFFIMSSSGGL VDSDEATQRPVQLIESGPAAGAVAAAEFSRIISVRNVIGFDMGGTTAKASSIVNHEPEVTTEYEVGGEVHHGRLVKGSGY PVRFPFIDLAEVSSGGGTIIWRDEAGALRVGPLSAGADPGPICYDKGGVEPTLTDANLALGRIGDYLLGGEMKLNKEGAI KGLRRLGDPIDVALNAIKLANIEMARAVRLVTVERGLNPGDFALMAFGGAGPQHSAEIAEELGVSTIIVPPEPGAFSALG LLMADEKFEVRMSYPRDLEEGFMKLEDELSQRLGKVSYFLRYADVRYRGQGWELTIPVNRPARIEDVERTFNDKHQATYG FRLSKPIEVVTIRVFAVVTRLKPRFKVKNLGGEAKPRGFRRVFFNEWVEAPVYWRGDIPMGQVIEGPAVIEEYGSTIVVP PRWRAEVGGNAEVIMRR >Mature_656_residues GCMVIVAVDVGGTFTDFVTLSDDGSIESFKVLSTPRNPEAAVLGGLRRINARIDEVLHATTIGTNALLGQVGLELPKVAL FTTKGFRDVIEIGRQNRPRLYDLFFEKPKPLVPRELRFEIEERTLANGEVVKEVNPREVEEYAVKAKSLGVNSVAVSYLH SYINPRNEEITGSVLGRYFNYVALSSKIAPEPREYERTSTAVVNAALMPIVSQYINEFSKGLRELGIDKFFIMSSSGGLV DSDEATQRPVQLIESGPAAGAVAAAEFSRIISVRNVIGFDMGGTTAKASSIVNHEPEVTTEYEVGGEVHHGRLVKGSGYP VRFPFIDLAEVSSGGGTIIWRDEAGALRVGPLSAGADPGPICYDKGGVEPTLTDANLALGRIGDYLLGGEMKLNKEGAIK GLRRLGDPIDVALNAIKLANIEMARAVRLVTVERGLNPGDFALMAFGGAGPQHSAEIAEELGVSTIIVPPEPGAFSALGL LMADEKFEVRMSYPRDLEEGFMKLEDELSQRLGKVSYFLRYADVRYRGQGWELTIPVNRPARIEDVERTFNDKHQATYGF RLSKPIEVVTIRVFAVVTRLKPRFKVKNLGGEAKPRGFRRVFFNEWVEAPVYWRGDIPMGQVIEGPAVIEEYGSTIVVPP RWRAEVGGNAEVIMRR
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=734, Percent_Identity=30.1089918256131, Blast_Score=221, Evalue=2e-57, Organism=Caenorhabditis elegans, GI133901900, Length=726, Percent_Identity=28.9256198347107, Blast_Score=218, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6322634, Length=750, Percent_Identity=29.0666666666667, Blast_Score=239, Evalue=8e-64, Organism=Drosophila melanogaster, GI45550492, Length=748, Percent_Identity=31.0160427807487, Blast_Score=243, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 71957; Mature: 71826
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCMVIVAVDVGGTFTDFVTLSDDGSIESFKVLSTPRNPEAAVLGGLRRINARIDEVLHA CCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TTIGTNALLGQVGLELPKVALFTTKGFRDVIEIGRQNRPRLYDLFFEKPKPLVPRELRFE HHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHEE IEERTLANGEVVKEVNPREVEEYAVKAKSLGVNSVAVSYLHSYINPRNEEITGSVLGRYF EHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH NYVALSSKIAPEPREYERTSTAVVNAALMPIVSQYINEFSKGLRELGIDKFFIMSSSGGL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC VDSDEATQRPVQLIESGPAAGAVAAAEFSRIISVRNVIGFDMGGTTAKASSIVNHEPEVT CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCE TEYEVGGEVHHGRLVKGSGYPVRFPFIDLAEVSSGGGTIIWRDEAGALRVGPLSAGADPG EEEECCCEEECCEEEECCCCEEEECCEEHHHCCCCCCEEEEECCCCEEEECCCCCCCCCC PICYDKGGVEPTLTDANLALGRIGDYLLGGEMKLNKEGAIKGLRRLGDPIDVALNAIKLA CEEECCCCCCCEECCCCHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHEE NIEMARAVRLVTVERGLNPGDFALMAFGGAGPQHSAEIAEELGVSTIIVPPEPGAFSALG CHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHH LLMADEKFEVRMSYPRDLEEGFMKLEDELSQRLGKVSYFLRYADVRYRGQGWELTIPVNR HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC PARIEDVERTFNDKHQATYGFRLSKPIEVVTIRVFAVVTRLKPRFKVKNLGGEAKPRGFR CCCHHHHHHHHCCCCCEEECEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH RVFFNEWVEAPVYWRGDIPMGQVIEGPAVIEEYGSTIVVPPRWRAEVGGNAEVIMRR HHHHHHHHCCCEEEECCCCCCCEECCCHHHHHCCCEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure GCMVIVAVDVGGTFTDFVTLSDDGSIESFKVLSTPRNPEAAVLGGLRRINARIDEVLHA CEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TTIGTNALLGQVGLELPKVALFTTKGFRDVIEIGRQNRPRLYDLFFEKPKPLVPRELRFE HHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHEE IEERTLANGEVVKEVNPREVEEYAVKAKSLGVNSVAVSYLHSYINPRNEEITGSVLGRYF EHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH NYVALSSKIAPEPREYERTSTAVVNAALMPIVSQYINEFSKGLRELGIDKFFIMSSSGGL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC VDSDEATQRPVQLIESGPAAGAVAAAEFSRIISVRNVIGFDMGGTTAKASSIVNHEPEVT CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCE TEYEVGGEVHHGRLVKGSGYPVRFPFIDLAEVSSGGGTIIWRDEAGALRVGPLSAGADPG EEEECCCEEECCEEEECCCCEEEECCEEHHHCCCCCCEEEEECCCCEEEECCCCCCCCCC PICYDKGGVEPTLTDANLALGRIGDYLLGGEMKLNKEGAIKGLRRLGDPIDVALNAIKLA CEEECCCCCCCEECCCCHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHEE NIEMARAVRLVTVERGLNPGDFALMAFGGAGPQHSAEIAEELGVSTIIVPPEPGAFSALG CHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHH LLMADEKFEVRMSYPRDLEEGFMKLEDELSQRLGKVSYFLRYADVRYRGQGWELTIPVNR HHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC PARIEDVERTFNDKHQATYGFRLSKPIEVVTIRVFAVVTRLKPRFKVKNLGGEAKPRGFR CCCHHHHHHHHCCCCCEEECEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH RVFFNEWVEAPVYWRGDIPMGQVIEGPAVIEEYGSTIVVPPRWRAEVGGNAEVIMRR HHHHHHHHCCCEEEECCCCCCCEECCCHHHHHCCCEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]