| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041955
Identifier: 159041955
GI number: 159041955
Start: 1468330
End: 1469883
Strand: Reverse
Name: 159041955
Synonym: Cmaq_1391
Alternate gene names: NA
Gene position: 1469883-1468330 (Counterclockwise)
Preceding gene: 159041956
Following gene: 159041951
Centisome position: 70.75
GC content: 47.88
Gene sequence:
>1554_bases ATGGTATCCTGGGAAATAATCTACAGGGCATCAGTATTCATAGCTGAGGAAATGGGTGTGGCATTGAAGCGCTCGGCCTT TTCCCCAAATATCCGTGAGAGGATGGATCACAGTTGCGCAATTACTGATGAGGATGGGAATATCATTGCCCAAGCCGAGC ACATACCCGTTCACCTGGGTTCCTTTAAGATTGGTGTTAGGAATCTTTTAGACTGGTTATCCAGGGAGGGTGTTGAGCTT AGGCAGGGTGACGCCGTTGTCTTGAATGACCCGTATATTTCAGGGACACATTTAAACGACGTTATGGTTACTCAACCCAT ATACCACGGCAGTAGGTTGGTGGGTTACGTTGTTAATAAGGCTCACCACGTTGATGTAGGCGGCCCCGTACCCGGTAGTA TTAATCCAAACGCCAGGACACTGTATGAGGAGGGTTTAATACTGCCTCCCGTTAAGATAATGGATAACGGTGAACTCAAG CGTGATGTCCTTAACATAATATTGAGTAATTTCAAAACAACTGAGGCTGCTCTCGGGGACATTATGGCTCAATTATCAGC CAACTCAGTGGGTGTATCTAGGGTTGCGGAGTTGATTAGTAAGTATGGTGTCGATGAGGTTGTTAACTCATGGAGGGAGA GCATTACATACGGTAGGAGGCTGAGTCTACTTGAAATTAGTAAGTGGCCTAGGGGTGATTATAATGCTGTTGACTACATG GAGTTGGGGGATGAATTACTACCCATAAGGGTTAAGGTTAGTATTAACGATGAGGGCATTACCGCGGACTTCTCTGGGAC GCATGGGCAGGTGGATGCCCCGATAAATGCGGTTTACGGTGTAACCTTCTCAGCGGTCTCATTCGCCATTAGATCCTTGA TTCAAACCGATGTACCAACCAATGAAGGCTTCTACAGTGTAATCAATGTTAATGCACCTGAAGGCACCCTGGTTAACCCA AGGAAACCAGCCCCAGTCTCAGGGGGTAATGTGGAGACCACCCAGAGGATTGCGGATGTGGTTTTTAAGGCATTAGCCAA TGCACTACCTAACAGTGTCCCAGCAGCCGGCTCCGGAACCATGATGAATATCATGATTGGCGGCGCATTACCCAATGGAG GCTACTGGGCTTACTATGAAACAGTGGGTGGAGGCACTGGTGGTAGGCCTGGGAAACCTGGTGTGAGTGGTGTTCATGTT AATATGACTAACACCTTGAATACACCCATTGAGATTGCTGAGAGGCAGTACCCATTATTATTCACGGCTTACAGGATTAG GGAGGGTAGTGGTGGTTACGGTAAGTATAAGGGTGGTGATGGGGTGGTTAGGTCATTTAAGGTGTTAACTAAGGCTAGGC TCTCAATAATGGCTGAGAGATTCAGGACTAGGCCGTGGGGATTACAGGGTGGTGGAGATGGGAAACCAGGTAGGGTTACT GTGAGGAGGCTTAATGGTGTTGAGGAATTACCAAGTAAAGTAACCATTGACCTGGAGCCTGGGGATGAGGTCATAGTTGA GACACCTGGTGGTGGGGGTTGGGGTAGTGGTTAG
Upstream 100 bases:
>100_bases CCAGCCGTAATTGAGGAGTATGGTTCAACAATAGTGGTGCCGCCTAGGTGGAGGGCTGAGGTTGGTGGGAATGCGGAGGT GATTATGAGGAGGTGACGCC
Downstream 100 bases:
>100_bases GCTAGTTAATGGTGAGCTTTGATATGAAGAAGCCTTCAGCATTATGAATATGGGGCATTACCCTACCCACAACGCTTGAT ACAGGGTAATTCACGTAACC
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MVSWEIIYRASVFIAEEMGVALKRSAFSPNIRERMDHSCAITDEDGNIIAQAEHIPVHLGSFKIGVRNLLDWLSREGVEL RQGDAVVLNDPYISGTHLNDVMVTQPIYHGSRLVGYVVNKAHHVDVGGPVPGSINPNARTLYEEGLILPPVKIMDNGELK RDVLNIILSNFKTTEAALGDIMAQLSANSVGVSRVAELISKYGVDEVVNSWRESITYGRRLSLLEISKWPRGDYNAVDYM ELGDELLPIRVKVSINDEGITADFSGTHGQVDAPINAVYGVTFSAVSFAIRSLIQTDVPTNEGFYSVINVNAPEGTLVNP RKPAPVSGGNVETTQRIADVVFKALANALPNSVPAAGSGTMMNIMIGGALPNGGYWAYYETVGGGTGGRPGKPGVSGVHV NMTNTLNTPIEIAERQYPLLFTAYRIREGSGGYGKYKGGDGVVRSFKVLTKARLSIMAERFRTRPWGLQGGGDGKPGRVT VRRLNGVEELPSKVTIDLEPGDEVIVETPGGGGWGSG
Sequences:
>Translated_517_residues MVSWEIIYRASVFIAEEMGVALKRSAFSPNIRERMDHSCAITDEDGNIIAQAEHIPVHLGSFKIGVRNLLDWLSREGVEL RQGDAVVLNDPYISGTHLNDVMVTQPIYHGSRLVGYVVNKAHHVDVGGPVPGSINPNARTLYEEGLILPPVKIMDNGELK RDVLNIILSNFKTTEAALGDIMAQLSANSVGVSRVAELISKYGVDEVVNSWRESITYGRRLSLLEISKWPRGDYNAVDYM ELGDELLPIRVKVSINDEGITADFSGTHGQVDAPINAVYGVTFSAVSFAIRSLIQTDVPTNEGFYSVINVNAPEGTLVNP RKPAPVSGGNVETTQRIADVVFKALANALPNSVPAAGSGTMMNIMIGGALPNGGYWAYYETVGGGTGGRPGKPGVSGVHV NMTNTLNTPIEIAERQYPLLFTAYRIREGSGGYGKYKGGDGVVRSFKVLTKARLSIMAERFRTRPWGLQGGGDGKPGRVT VRRLNGVEELPSKVTIDLEPGDEVIVETPGGGGWGSG >Mature_517_residues MVSWEIIYRASVFIAEEMGVALKRSAFSPNIRERMDHSCAITDEDGNIIAQAEHIPVHLGSFKIGVRNLLDWLSREGVEL RQGDAVVLNDPYISGTHLNDVMVTQPIYHGSRLVGYVVNKAHHVDVGGPVPGSINPNARTLYEEGLILPPVKIMDNGELK RDVLNIILSNFKTTEAALGDIMAQLSANSVGVSRVAELISKYGVDEVVNSWRESITYGRRLSLLEISKWPRGDYNAVDYM ELGDELLPIRVKVSINDEGITADFSGTHGQVDAPINAVYGVTFSAVSFAIRSLIQTDVPTNEGFYSVINVNAPEGTLVNP RKPAPVSGGNVETTQRIADVVFKALANALPNSVPAAGSGTMMNIMIGGALPNGGYWAYYETVGGGTGGRPGKPGVSGVHV NMTNTLNTPIEIAERQYPLLFTAYRIREGSGGYGKYKGGDGVVRSFKVLTKARLSIMAERFRTRPWGLQGGGDGKPGRVT VRRLNGVEELPSKVTIDLEPGDEVIVETPGGGGWGSG
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=535, Percent_Identity=36.2616822429907, Blast_Score=291, Evalue=7e-79, Organism=Caenorhabditis elegans, GI133901900, Length=526, Percent_Identity=37.0722433460076, Blast_Score=318, Evalue=6e-87, Organism=Caenorhabditis elegans, GI133901902, Length=510, Percent_Identity=36.078431372549, Blast_Score=296, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6322634, Length=536, Percent_Identity=34.1417910447761, Blast_Score=290, Evalue=3e-79, Organism=Drosophila melanogaster, GI45550492, Length=535, Percent_Identity=37.196261682243, Blast_Score=306, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 55659; Mature: 55659
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSWEIIYRASVFIAEEMGVALKRSAFSPNIRERMDHSCAITDEDGNIIAQAEHIPVHLG CCEEEEEEEEEEEEHHHHCHHHHHCCCCCCHHHHCCCCEEEECCCCCEEEEECCCEEEEC SFKIGVRNLLDWLSREGVELRQGDAVVLNDPYISGTHLNDVMVTQPIYHGSRLVGYVVNK CEEHHHHHHHHHHHCCCCEEECCCEEEEECCEECCCCCCCEEEECCCCCCCHHEEHHHCC AHHVDVGGPVPGSINPNARTLYEEGLILPPVKIMDNGELKRDVLNIILSNFKTTEAALGD CEEEECCCCCCCCCCCCHHHHHHCCEECCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHH IMAQLSANSVGVSRVAELISKYGVDEVVNSWRESITYGRRLSLLEISKWPRGDYNAVDYM HHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH ELGDELLPIRVKVSINDEGITADFSGTHGQVDAPINAVYGVTFSAVSFAIRSLIQTDVPT HCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC NEGFYSVINVNAPEGTLVNPRKPAPVSGGNVETTQRIADVVFKALANALPNSVPAAGSGT CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC MMNIMIGGALPNGGYWAYYETVGGGTGGRPGKPGVSGVHVNMTNTLNTPIEIAERQYPLL EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEE FTAYRIREGSGGYGKYKGGDGVVRSFKVLTKARLSIMAERFRTRPWGLQGGGDGKPGRVT EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VRRLNGVEELPSKVTIDLEPGDEVIVETPGGGGWGSG EEECCCHHHCCCEEEEEECCCCEEEEECCCCCCCCCC >Mature Secondary Structure MVSWEIIYRASVFIAEEMGVALKRSAFSPNIRERMDHSCAITDEDGNIIAQAEHIPVHLG CCEEEEEEEEEEEEHHHHCHHHHHCCCCCCHHHHCCCCEEEECCCCCEEEEECCCEEEEC SFKIGVRNLLDWLSREGVELRQGDAVVLNDPYISGTHLNDVMVTQPIYHGSRLVGYVVNK CEEHHHHHHHHHHHCCCCEEECCCEEEEECCEECCCCCCCEEEECCCCCCCHHEEHHHCC AHHVDVGGPVPGSINPNARTLYEEGLILPPVKIMDNGELKRDVLNIILSNFKTTEAALGD CEEEECCCCCCCCCCCCHHHHHHCCEECCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHH IMAQLSANSVGVSRVAELISKYGVDEVVNSWRESITYGRRLSLLEISKWPRGDYNAVDYM HHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH ELGDELLPIRVKVSINDEGITADFSGTHGQVDAPINAVYGVTFSAVSFAIRSLIQTDVPT HCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC NEGFYSVINVNAPEGTLVNPRKPAPVSGGNVETTQRIADVVFKALANALPNSVPAAGSGT CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC MMNIMIGGALPNGGYWAYYETVGGGTGGRPGKPGVSGVHVNMTNTLNTPIEIAERQYPLL EEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEE FTAYRIREGSGGYGKYKGGDGVVRSFKVLTKARLSIMAERFRTRPWGLQGGGDGKPGRVT EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE VRRLNGVEELPSKVTIDLEPGDEVIVETPGGGGWGSG EEECCCHHHCCCEEEEEECCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]