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The map label for this gene is 159041813

Identifier: 159041813

GI number: 159041813

Start: 1318073

End: 1319395

Strand: Reverse

Name: 159041813

Synonym: Cmaq_1248

Alternate gene names: NA

Gene position: 1319395-1318073 (Counterclockwise)

Preceding gene: 159041814

Following gene: 159041810

Centisome position: 63.51

GC content: 43.39

Gene sequence:

>1323_bases
ATGTGGAGTGGGGGCCGAAATACCCTCACTATGCCAGACGTGGGTACCACTAGAACAGTGGTTGTTCGCCTTCTACCAAA
TGATGTACAGGAGGGGGAACTAGGACGATTAGCTAACGCCTCAACATCACTTTTCAACGAAGTGAATTACGAAAGAAGAC
GGCGATTCTTCAACAAGCAGAAGATGGATTTCAAAGGAACGTATAAGAAATACTACGAGAAGTACAAGGGAATACTAAAG
GTGAATGCACAAGCAGTTATTCAAAAGAATAATGAAGCGTGGTCATCATTCTTCTCTCTCCTGAAGAAGGGTGAGAAAGC
CTCCCCACCAGGCTATTGGAAAAGAGGAGGGGGAAGAGTGTTAATCCTTGTTGTGAGACAGGATAGGTACTACGTGGATG
TTGAGAACCACAAGCTAGTGTTGAGGGACTTTAAACTAGAGATTCCCTTCGCCGGGAGAGTGAGGTGGTTTGGTAAACAA
GGTAGGCTAGAGATTCATTACGATGATACTCGGAACAGGTGGTATGCATATATTCCAGTTGAGGTTGGTGTTACAACAAC
ACGGACTGGAAAAGAGAGTAAGTTCATAGTTAAAGGGGAAAGGAAAGGGATTCAGCTTTATCAACCGAAAGGAAATAAGG
TGGCGTCTGCTGACCTAGGCATAAACATTCTAGCTAGTGTTGTTGTGAATGATGGTACTTGGATTCTCTATAAGAGTAGA
GCTAAGGAGGATTACTTCTATTTTCAGAGGAGGATAGCTGAGGTACAATCAATAGTAGGCAAGGCTAAGAATGCTGGTGA
GCTAGAGGCTTATGAGGAAGCAAGAAGAGAGGAAGGAAGATTATATGGAAAGTTGTACCGTCGCCTTCTCCATCTGTATA
GGAGCTTCGCATCTCATCTAATGAAGACGTTGTACGAGATGGGTGTGTCAACCCTCATTGTTGGGTATCCTTACCTCATT
GCACAAGATAAAGGTAACAAGTTCACAGTGAATATGTGGTCTTACTCAAAACTATTTGAGGCTATTCTGTTGAAAGCCCA
AGAGTACGGTATTAAGGTCATGAAGGTTGTGGAGTATAACACATCTAGAGTATGCGCCTTTCACGATGTTGAAGTTGTGA
GGAAACCTAGGGGAGTAATTTCATGTCCACATGGTCATAAACTACACGCAGACTTAAATGGAGCATTAAACATCATGAAA
CTAGGAGTAGGAATAGTCATAAACGAAGTGAAAAACCCCCTCTCCTTCTTTATTGATCATAACCAAGTAGCCCCCACAAA
GGGGGGTAACACCCAAGACCCCAACGAAACCCCCACCCTTTAA

Upstream 100 bases:

>100_bases
AAGAGGTGGCAAACTTCGCCTTTTCAAGGCGGGGTAGAGTTTTTAAGTTTTCTTTTTCATAAATCTCCTAGTGGTATCCG
CGTCTGGTTACTCTACTAAA

Downstream 100 bases:

>100_bases
GACGGGAAAGGGGTCAGTTAACGATATACCTCATGTATAGGAGTAGGGCTGAGGAGCGTTTAGTGAATAATTCCGCTTAA
TCAATATCATTAACCTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: IS Element ISTsi3 OrfB Probably Transposase; Transposase ISC; Neutral Protease; C-Terminal Of Inactivated Transposase; IS Element ISDka2 OrfB

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MWSGGRNTLTMPDVGTTRTVVVRLLPNDVQEGELGRLANASTSLFNEVNYERRRRFFNKQKMDFKGTYKKYYEKYKGILK
VNAQAVIQKNNEAWSSFFSLLKKGEKASPPGYWKRGGGRVLILVVRQDRYYVDVENHKLVLRDFKLEIPFAGRVRWFGKQ
GRLEIHYDDTRNRWYAYIPVEVGVTTTRTGKESKFIVKGERKGIQLYQPKGNKVASADLGINILASVVVNDGTWILYKSR
AKEDYFYFQRRIAEVQSIVGKAKNAGELEAYEEARREEGRLYGKLYRRLLHLYRSFASHLMKTLYEMGVSTLIVGYPYLI
AQDKGNKFTVNMWSYSKLFEAILLKAQEYGIKVMKVVEYNTSRVCAFHDVEVVRKPRGVISCPHGHKLHADLNGALNIMK
LGVGIVINEVKNPLSFFIDHNQVAPTKGGNTQDPNETPTL

Sequences:

>Translated_440_residues
MWSGGRNTLTMPDVGTTRTVVVRLLPNDVQEGELGRLANASTSLFNEVNYERRRRFFNKQKMDFKGTYKKYYEKYKGILK
VNAQAVIQKNNEAWSSFFSLLKKGEKASPPGYWKRGGGRVLILVVRQDRYYVDVENHKLVLRDFKLEIPFAGRVRWFGKQ
GRLEIHYDDTRNRWYAYIPVEVGVTTTRTGKESKFIVKGERKGIQLYQPKGNKVASADLGINILASVVVNDGTWILYKSR
AKEDYFYFQRRIAEVQSIVGKAKNAGELEAYEEARREEGRLYGKLYRRLLHLYRSFASHLMKTLYEMGVSTLIVGYPYLI
AQDKGNKFTVNMWSYSKLFEAILLKAQEYGIKVMKVVEYNTSRVCAFHDVEVVRKPRGVISCPHGHKLHADLNGALNIMK
LGVGIVINEVKNPLSFFIDHNQVAPTKGGNTQDPNETPTL
>Mature_440_residues
MWSGGRNTLTMPDVGTTRTVVVRLLPNDVQEGELGRLANASTSLFNEVNYERRRRFFNKQKMDFKGTYKKYYEKYKGILK
VNAQAVIQKNNEAWSSFFSLLKKGEKASPPGYWKRGGGRVLILVVRQDRYYVDVENHKLVLRDFKLEIPFAGRVRWFGKQ
GRLEIHYDDTRNRWYAYIPVEVGVTTTRTGKESKFIVKGERKGIQLYQPKGNKVASADLGINILASVVVNDGTWILYKSR
AKEDYFYFQRRIAEVQSIVGKAKNAGELEAYEEARREEGRLYGKLYRRLLHLYRSFASHLMKTLYEMGVSTLIVGYPYLI
AQDKGNKFTVNMWSYSKLFEAILLKAQEYGIKVMKVVEYNTSRVCAFHDVEVVRKPRGVISCPHGHKLHADLNGALNIMK
LGVGIVINEVKNPLSFFIDHNQVAPTKGGNTQDPNETPTL

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50508; Mature: 50508

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSGGRNTLTMPDVGTTRTVVVRLLPNDVQEGELGRLANASTSLFNEVNYERRRRFFNKQ
CCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHC
KMDFKGTYKKYYEKYKGILKVNAQAVIQKNNEAWSSFFSLLKKGEKASPPGYWKRGGGRV
CCCCCHHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEECCCCEE
LILVVRQDRYYVDVENHKLVLRDFKLEIPFAGRVRWFGKQGRLEIHYDDTRNRWYAYIPV
EEEEEECCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEEE
EVGVTTTRTGKESKFIVKGERKGIQLYQPKGNKVASADLGINILASVVVNDGTWILYKSR
EECEEECCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCEEEEEEEECCCEEEEEECC
AKEDYFYFQRRIAEVQSIVGKAKNAGELEAYEEARREEGRLYGKLYRRLLHLYRSFASHL
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MKTLYEMGVSTLIVGYPYLIAQDKGNKFTVNMWSYSKLFEAILLKAQEYGIKVMKVVEYN
HHHHHHCCHHEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEEEECC
TSRVCAFHDVEVVRKPRGVISCPHGHKLHADLNGALNIMKLGVGIVINEVKNPLSFFIDH
CCEEEEEECHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHHEEHHHCCCHHEEEEC
NQVAPTKGGNTQDPNETPTL
CEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWSGGRNTLTMPDVGTTRTVVVRLLPNDVQEGELGRLANASTSLFNEVNYERRRRFFNKQ
CCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCHHCCHHHHHHHCCHHHHHHHHHHC
KMDFKGTYKKYYEKYKGILKVNAQAVIQKNNEAWSSFFSLLKKGEKASPPGYWKRGGGRV
CCCCCHHHHHHHHHHCCEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEECCCCEE
LILVVRQDRYYVDVENHKLVLRDFKLEIPFAGRVRWFGKQGRLEIHYDDTRNRWYAYIPV
EEEEEECCEEEEEECCCEEEEEEEEEECCCCCCEEEECCCCCEEEEEECCCCCEEEEEEE
EVGVTTTRTGKESKFIVKGERKGIQLYQPKGNKVASADLGINILASVVVNDGTWILYKSR
EECEEECCCCCCCEEEEEECCCCEEEECCCCCEEEECCCCCEEEEEEEECCCEEEEEECC
AKEDYFYFQRRIAEVQSIVGKAKNAGELEAYEEARREEGRLYGKLYRRLLHLYRSFASHL
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MKTLYEMGVSTLIVGYPYLIAQDKGNKFTVNMWSYSKLFEAILLKAQEYGIKVMKVVEYN
HHHHHHCCHHEEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEEEECC
TSRVCAFHDVEVVRKPRGVISCPHGHKLHADLNGALNIMKLGVGIVINEVKNPLSFFIDH
CCEEEEEECHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHHEEHHHCCCHHEEEEC
NQVAPTKGGNTQDPNETPTL
CEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA