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The map label for this gene is rfaE [C]

Identifier: 159041810

GI number: 159041810

Start: 1314976

End: 1315701

Strand: Reverse

Name: rfaE [C]

Synonym: Cmaq_1245

Alternate gene names: 159041810

Gene position: 1315701-1314976 (Counterclockwise)

Preceding gene: 159041813

Following gene: 159041809

Centisome position: 63.33

GC content: 46.97

Gene sequence:

>726_bases
ATGAGTACCTTAGCTGATAGGGTATTGACTTATGTTAGAAACGTTGAGCAGGCTATTGAGGCATTACGCACTAATGCTAA
TGGTGGTGGGGAGGTTGGTGAATTAATTGAGTTGGCTGAGGCTTATCTTAAGGATACTTTACACTACTTCAAGGTGGGTG
ACTATGAGACGGCTCTGGCTACGATATCCTACGCAGAGGGCTTGCTGGATGCCTTAAGGATCCTTAAGTTGAGTGAGGTT
AATTGGAGGAAGCCGAGTGAATTAGCTAAGTTAGCGTCAAGGAAGGTTTTCGTGGCTGGCACATTCGATATAATACACCC
AGGCCACGTGGGGTACCTTAAGTACGCCTGGGGTTTAGGCAGGGTTGTGGCTGTTGTCTCCACTGATGAGAGTGTTAAGA
GGATTAAGGGTAGGGAGCCTATAATACCCGCTAAGCAGAGGGTTGAGGTGCTTGAGGCCATAGAGTACGTTACTAAGGCT
AGGGTTGGTTATGAGGATGACATGTTTAGGGTTGTTGAGGAGGAGAAGCCTGATATAATACTCCTCGGGCCTAATCAACC
CTTCACCGAGGAGGAGATTAGGAGAGCCTTAAGGAGTAGGGGTATTAACGCTGAGGTGGTTAGGATGCCTAATATTATTA
ACTGCCAGTTATGCAGCACCAGTAGCATAGTTAGGAGGATTCTGGAGATGGCCGGGGAATTAACCTCATCCCTCAGGAAT
CATTAA

Upstream 100 bases:

>100_bases
GGCTCCCACATGTAGGCTACTTCACGGGATTAATGATTAAGCGGTGATACCTATTGCTTAGTCGCAAGTGTTTTTAACCC
GACGCAACATTAGGCATTTA

Downstream 100 bases:

>100_bases
GCCGCGTTAATACTTATACGCTTAATTAGGAAAACCATAAAGCCTACTTAACGTGGGTTTAATCGGTGAGTTGGCTTAAT
GGTTAGGAGGATTATTAGTG

Product: cytidyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSTLADRVLTYVRNVEQAIEALRTNANGGGEVGELIELAEAYLKDTLHYFKVGDYETALATISYAEGLLDALRILKLSEV
NWRKPSELAKLASRKVFVAGTFDIIHPGHVGYLKYAWGLGRVVAVVSTDESVKRIKGREPIIPAKQRVEVLEAIEYVTKA
RVGYEDDMFRVVEEEKPDIILLGPNQPFTEEEIRRALRSRGINAEVVRMPNIINCQLCSTSSIVRRILEMAGELTSSLRN
H

Sequences:

>Translated_241_residues
MSTLADRVLTYVRNVEQAIEALRTNANGGGEVGELIELAEAYLKDTLHYFKVGDYETALATISYAEGLLDALRILKLSEV
NWRKPSELAKLASRKVFVAGTFDIIHPGHVGYLKYAWGLGRVVAVVSTDESVKRIKGREPIIPAKQRVEVLEAIEYVTKA
RVGYEDDMFRVVEEEKPDIILLGPNQPFTEEEIRRALRSRGINAEVVRMPNIINCQLCSTSSIVRRILEMAGELTSSLRN
H
>Mature_240_residues
STLADRVLTYVRNVEQAIEALRTNANGGGEVGELIELAEAYLKDTLHYFKVGDYETALATISYAEGLLDALRILKLSEVN
WRKPSELAKLASRKVFVAGTFDIIHPGHVGYLKYAWGLGRVVAVVSTDESVKRIKGREPIIPAKQRVEVLEAIEYVTKAR
VGYEDDMFRVVEEEKPDIILLGPNQPFTEEEIRRALRSRGINAEVVRMPNIINCQLCSTSSIVRRILEMAGELTSSLRNH

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0615

COG function: function code MI; Cytidylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789432, Length=149, Percent_Identity=35.5704697986577, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: 2.7.-.- [C]

Molecular weight: Translated: 27013; Mature: 26882

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLADRVLTYVRNVEQAIEALRTNANGGGEVGELIELAEAYLKDTLHYFKVGDYETALA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TISYAEGLLDALRILKLSEVNWRKPSELAKLASRKVFVAGTFDIIHPGHVGYLKYAWGLG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHH
RVVAVVSTDESVKRIKGREPIIPAKQRVEVLEAIEYVTKARVGYEDDMFRVVEEEKPDII
HEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEE
LLGPNQPFTEEEIRRALRSRGINAEVVRMPNIINCQLCSTSSIVRRILEMAGELTSSLRN
EECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHC
H
C
>Mature Secondary Structure 
STLADRVLTYVRNVEQAIEALRTNANGGGEVGELIELAEAYLKDTLHYFKVGDYETALA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TISYAEGLLDALRILKLSEVNWRKPSELAKLASRKVFVAGTFDIIHPGHVGYLKYAWGLG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHH
RVVAVVSTDESVKRIKGREPIIPAKQRVEVLEAIEYVTKARVGYEDDMFRVVEEEKPDII
HEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEE
LLGPNQPFTEEEIRRALRSRGINAEVVRMPNIINCQLCSTSSIVRRILEMAGELTSSLRN
EECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]