| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041591
Identifier: 159041591
GI number: 159041591
Start: 1072488
End: 1072856
Strand: Reverse
Name: 159041591
Synonym: Cmaq_1022
Alternate gene names: NA
Gene position: 1072856-1072488 (Counterclockwise)
Preceding gene: 159041595
Following gene: 159041590
Centisome position: 51.64
GC content: 44.17
Gene sequence:
>369_bases ATGTCAACTCAACTAGACCCAATATCAGTAGCCAGAATGCCTGAAAAACAGAGGGAAAGCACCATTAGGGGTGTTTTAGA GGGGCTCTTTAAGATGAAGCAGGATGACGCCTTTAAGGCGTTGAAATCCGTGATCCAAACCCTAGCTGAAAAAGCCACCG ACGATGAGTACATTAACTGGTGTATAACAACAATGAGGATACTGGCCAGTTACCCAGATGATGTCGTTAAGGCCGGTTTA ACACTTAGGAGAAACGTGGTGTCAAGCCTTGATAAGAGGCTTGCCGATAGGGATGCTGCAATAATCAGTAGGGTACTTAA CATGCTTGATAATAACACTAGGCAGAAGCTAATGCGAAACATGCCTTAA
Upstream 100 bases:
>100_bases GTAAATCACTCTCAATGAGAAACCCATTAAAGTAATCACGGTACTTAATGCTACACAACTTAGCGTAATGTATTTAAGCA GTAAAATAATTCATTAATCC
Downstream 100 bases:
>100_bases GTACCTTTCTCCCTTTAAATCCCTTAAACACAAGCATTATTACTCCCTGTTACCCGCCTAATGAGTGGTTAATGCAGTAT CCTACCTTAGGGTTTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSTQLDPISVARMPEKQRESTIRGVLEGLFKMKQDDAFKALKSVIQTLAEKATDDEYINWCITTMRILASYPDDVVKAGL TLRRNVVSSLDKRLADRDAAIISRVLNMLDNNTRQKLMRNMP
Sequences:
>Translated_122_residues MSTQLDPISVARMPEKQRESTIRGVLEGLFKMKQDDAFKALKSVIQTLAEKATDDEYINWCITTMRILASYPDDVVKAGL TLRRNVVSSLDKRLADRDAAIISRVLNMLDNNTRQKLMRNMP >Mature_121_residues STQLDPISVARMPEKQRESTIRGVLEGLFKMKQDDAFKALKSVIQTLAEKATDDEYINWCITTMRILASYPDDVVKAGLT LRRNVVSSLDKRLADRDAAIISRVLNMLDNNTRQKLMRNMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13900; Mature: 13769
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLDPISVARMPEKQRESTIRGVLEGLFKMKQDDAFKALKSVIQTLAEKATDDEYINW CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH CITTMRILASYPDDVVKAGLTLRRNVVSSLDKRLADRDAAIISRVLNMLDNNTRQKLMRN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC MP CC >Mature Secondary Structure STQLDPISVARMPEKQRESTIRGVLEGLFKMKQDDAFKALKSVIQTLAEKATDDEYINW CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH CITTMRILASYPDDVVKAGLTLRRNVVSSLDKRLADRDAAIISRVLNMLDNNTRQKLMRN HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC MP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA