Click here to switch to the map view.

The map label for this gene is cca [H]

Identifier: 159041567

GI number: 159041567

Start: 1050984

End: 1052351

Strand: Reverse

Name: cca [H]

Synonym: Cmaq_0998

Alternate gene names: 159041567

Gene position: 1052351-1050984 (Counterclockwise)

Preceding gene: 159041568

Following gene: 159041566

Centisome position: 50.65

GC content: 44.3

Gene sequence:

>1368_bases
GTGCCTAATGTTGAGGATATTGTTAAGGAGGCCCTTAGGATCGTTACCCCCAGTCAGAGTGAGGTTAAGGTAATTAACGA
TACTGCCTCAGAGGTAATGCATATACTTGAGGGGATGCTGCATAAATTAGGCCTTGAGGCTGAGGTTACTTTACAGGGTT
CTATTGCCCACGGTACTTGGCTACCTGGGGATAGGGATATTGATGTTTTCTTAATTTTCCCACACAATGAGAAGTACATT
AACCTTGTTAAGTCAGGGGAATTGGTGAGGAGCCTAGCCGCGGCGATTTCAGAAATGGGTATAAGCTGGGTCATGAATTA
CGCTCAACACCCCTACTTAACGTTAACCTACAATGGCTTTAACATTGACGTAGTTCCATGCATTAGGATTAGGCCTGGTG
AAAAACCAGTAACAGCCGCTGATAGAACCCCCCTCCACACACTTTACTTAAGGGGTAGGTTAAGTGGCCTTGAGGATGAT
GTTAGGTTACTTAAGTTAATGATGAAGAGGATTAACGTCTATGGCGCCGAGGTTAAGGTTCAAGGCTTCAGCGGTTACTT
GACTGAATTAATCACGTTAGCCTACGGGGGCTTCATAAATACTCTTAAGGCAGCCTCAAGGTGGATCCCATTCAAGGTTA
AGATAATTCTTGAACCATCAAAGCAAGTTAACTTTAATGCACCATTAGTTGTCATTGATCCAGTTGACCCAGGTAGGAAT
GCTGCTGCAGCCGTCTCCCTAGACTCAATGGCGATCTTCATAGCAGCATCCAGGCGTTTCCTTAAGAAACCAAGCATGGT
TTTCTTCACCAACAGTGCTCAATCACCCTCAGAATCATTAACACTAACCACACCAACATTAATCCTGTATGGTGAGTACC
CTAAGGGTTACGTGGAGGATATTATTTGGGGTCAATTAAGGAGGATTGCATCAACAATATGGAGTACTGTGAGTAGCAGT
GGCTTTAAACCAATTGACATAGGCCTCTATACGCCGCAGGACAATTACATTGTAGTAATGCTTACTGTTGAGGAACCTGA
GTTACCTGAGTATGAAATACACATGGGTCCCCCTGTTTGGACTGATGAGGCTGAGGCATTCATTGAGAAGTACCTTAACG
CCAGTAATGTGGTTGGCCCATTCATAAGGAATGGAAGGTGGTTTGTGATTAGGCCTAGAAGGATTAAGAGTATTAAGGAA
GCCGTGGCCAAGAGTCTTAAGACTGTTAGAGGCAGTGTTGTTAAGGATTCCCTACTTAAGGGTCGTGTAGTTTTACTACG
TGATGCTAGTCAAGTTAATGAGCTACCAGTGGAGTTAAGGGGCATTGCGTTAACCTTCATGGGTAAGAGGCCTCACTGGC
TTACCTAA

Upstream 100 bases:

>100_bases
ATAAGGCGATTAACGAGCAAGGTGTCTTTAATAATAAGGTTAAGGGTTAATCACCGCAGTGATTCGGTAAGGGATTAAAA
GCGATTATTGGTGAATTAAT

Downstream 100 bases:

>100_bases
CAACTACCCTTAATGCGTCTCGGGCAAAATAATTAAAAGTACAAAGCCTGAATTTGCCTAAATGGCTAAAGTCTACGTGG
GGCCGGCTGGAGTACCAATG

Product: tRNA CCA-pyrophosphorylase

Products: NA

Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MPNVEDIVKEALRIVTPSQSEVKVINDTASEVMHILEGMLHKLGLEAEVTLQGSIAHGTWLPGDRDIDVFLIFPHNEKYI
NLVKSGELVRSLAAAISEMGISWVMNYAQHPYLTLTYNGFNIDVVPCIRIRPGEKPVTAADRTPLHTLYLRGRLSGLEDD
VRLLKLMMKRINVYGAEVKVQGFSGYLTELITLAYGGFINTLKAASRWIPFKVKIILEPSKQVNFNAPLVVIDPVDPGRN
AAAAVSLDSMAIFIAASRRFLKKPSMVFFTNSAQSPSESLTLTTPTLILYGEYPKGYVEDIIWGQLRRIASTIWSTVSSS
GFKPIDIGLYTPQDNYIVVMLTVEEPELPEYEIHMGPPVWTDEAEAFIEKYLNASNVVGPFIRNGRWFVIRPRRIKSIKE
AVAKSLKTVRGSVVKDSLLKGRVVLLRDASQVNELPVELRGIALTFMGKRPHWLT

Sequences:

>Translated_455_residues
MPNVEDIVKEALRIVTPSQSEVKVINDTASEVMHILEGMLHKLGLEAEVTLQGSIAHGTWLPGDRDIDVFLIFPHNEKYI
NLVKSGELVRSLAAAISEMGISWVMNYAQHPYLTLTYNGFNIDVVPCIRIRPGEKPVTAADRTPLHTLYLRGRLSGLEDD
VRLLKLMMKRINVYGAEVKVQGFSGYLTELITLAYGGFINTLKAASRWIPFKVKIILEPSKQVNFNAPLVVIDPVDPGRN
AAAAVSLDSMAIFIAASRRFLKKPSMVFFTNSAQSPSESLTLTTPTLILYGEYPKGYVEDIIWGQLRRIASTIWSTVSSS
GFKPIDIGLYTPQDNYIVVMLTVEEPELPEYEIHMGPPVWTDEAEAFIEKYLNASNVVGPFIRNGRWFVIRPRRIKSIKE
AVAKSLKTVRGSVVKDSLLKGRVVLLRDASQVNELPVELRGIALTFMGKRPHWLT
>Mature_454_residues
PNVEDIVKEALRIVTPSQSEVKVINDTASEVMHILEGMLHKLGLEAEVTLQGSIAHGTWLPGDRDIDVFLIFPHNEKYIN
LVKSGELVRSLAAAISEMGISWVMNYAQHPYLTLTYNGFNIDVVPCIRIRPGEKPVTAADRTPLHTLYLRGRLSGLEDDV
RLLKLMMKRINVYGAEVKVQGFSGYLTELITLAYGGFINTLKAASRWIPFKVKIILEPSKQVNFNAPLVVIDPVDPGRNA
AAAVSLDSMAIFIAASRRFLKKPSMVFFTNSAQSPSESLTLTTPTLILYGEYPKGYVEDIIWGQLRRIASTIWSTVSSSG
FKPIDIGLYTPQDNYIVVMLTVEEPELPEYEIHMGPPVWTDEAEAFIEKYLNASNVVGPFIRNGRWFVIRPRRIKSIKEA
VAKSLKTVRGSVVKDSLLKGRVVLLRDASQVNELPVELRGIALTFMGKRPHWLT

Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing

COG id: COG1746

COG function: function code J; tRNA nucleotidyltransferase (CCA-adding enzyme)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008229
- InterPro:   IPR002934
- InterPro:   IPR011068
- InterPro:   IPR015329 [H]

Pfam domain/function: PF01909 NTP_transf_2; PF09249 tRNA_NucTransf2 [H]

EC number: =2.7.7.21; =2.7.7.25 [H]

Molecular weight: Translated: 50847; Mature: 50716

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVEDIVKEALRIVTPSQSEVKVINDTASEVMHILEGMLHKLGLEAEVTLQGSIAHGTW
CCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC
LPGDRDIDVFLIFPHNEKYINLVKSGELVRSLAAAISEMGISWVMNYAQHPYLTLTYNGF
CCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
NIDVVPCIRIRPGEKPVTAADRTPLHTLYLRGRLSGLEDDVRLLKLMMKRINVYGAEVKV
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE
QGFSGYLTELITLAYGGFINTLKAASRWIPFKVKIILEPSKQVNFNAPLVVIDPVDPGRN
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCC
AAAAVSLDSMAIFIAASRRFLKKPSMVFFTNSAQSPSESLTLTTPTLILYGEYPKGYVED
CEEEEEHHHEEEEEEHHHHHHCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCCHHHHH
IIWGQLRRIASTIWSTVSSSGFKPIDIGLYTPQDNYIVVMLTVEEPELPEYEIHMGPPVW
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCC
TDEAEAFIEKYLNASNVVGPFIRNGRWFVIRPRRIKSIKEAVAKSLKTVRGSVVKDSLLK
CCHHHHHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVLLRDASQVNELPVELRGIALTFMGKRPHWLT
CEEEEEECCHHHHCCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
PNVEDIVKEALRIVTPSQSEVKVINDTASEVMHILEGMLHKLGLEAEVTLQGSIAHGTW
CCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC
LPGDRDIDVFLIFPHNEKYINLVKSGELVRSLAAAISEMGISWVMNYAQHPYLTLTYNGF
CCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
NIDVVPCIRIRPGEKPVTAADRTPLHTLYLRGRLSGLEDDVRLLKLMMKRINVYGAEVKV
EEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE
QGFSGYLTELITLAYGGFINTLKAASRWIPFKVKIILEPSKQVNFNAPLVVIDPVDPGRN
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCC
AAAAVSLDSMAIFIAASRRFLKKPSMVFFTNSAQSPSESLTLTTPTLILYGEYPKGYVED
CEEEEEHHHEEEEEEHHHHHHCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCCHHHHH
IIWGQLRRIASTIWSTVSSSGFKPIDIGLYTPQDNYIVVMLTVEEPELPEYEIHMGPPVW
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCC
TDEAEAFIEKYLNASNVVGPFIRNGRWFVIRPRRIKSIKEAVAKSLKTVRGSVVKDSLLK
CCHHHHHHHHHCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVLLRDASQVNELPVELRGIALTFMGKRPHWLT
CEEEEEECCHHHHCCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA