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The map label for this gene is 159041566

Identifier: 159041566

GI number: 159041566

Start: 1050083

End: 1050922

Strand: Reverse

Name: 159041566

Synonym: Cmaq_0997

Alternate gene names: NA

Gene position: 1050922-1050083 (Counterclockwise)

Preceding gene: 159041567

Following gene: 159041564

Centisome position: 50.58

GC content: 45.71

Gene sequence:

>840_bases
ATGGCTAAAGTCTACGTGGGGCCGGCTGGAGTACCAATGGGTTTAAAGGGTAAGAGGAGTACATTGGATGGGATTAAGTA
TGTTAAAGATATTGGGTTAAACGCCATGGAGGTTGAGTTCGTTAGGGGAGTTAGAATGAGTATCACTGACGCTGAGAATG
CTGGGAAATTGGCTAGGGAAATTGGGGTTAGGTTATCGATTCACGCACCATACTTCATAAACCTATGCAGTGATAAGGAT
AGTACCGTTGAGGCAAGCATTAAGAGGCTGATGGAATCCCTGGAGAGGGGGGAGGCTATGGGGGCTACGGTAGTGGTCTT
CCACCCAGCCTACTACGGTAAATTAGGCCCTGAGGGATGCTATAATGCAGTGAGGGAATCCGTAATGAGGGTAATTGAAT
TAATGGGTAAGGAGGGGATTAGCCACGTTAAACTTGGCTTAGAGGTAATGGCTAGGAGGAGCCAATTCGGTGGACTTGAG
GAGACTTTTAAGCTTGTTAAGGAGATCAATAACCCTCAAGTGGTGGCTGTGGTGGATTGGGGACACATATATGCTAGGAA
TGGGGGAAGTATAGATTATAAGGCTATATTAAACATGTGGAGGGAGTACTTCGGTAATCAACCAATGCACACCCACTTCA
CCGCCGTTAAGTATAGGAGGGGGGAGTGGGTTGATGAACATGAACCAATAGACACTAATAACCCACCCTTTGAACCTTTA
GCCCAGGAATTGGCTAAGGAGGATTTGGATATAACAATAATATGTGAATCACCCCTACTGGAGCAGGATGCATTAAAAAT
GAGGGATATGCTACTTAAGTACGGCAACACCATGGCTTAG

Upstream 100 bases:

>100_bases
TTAACCTTCATGGGTAAGAGGCCTCACTGGCTTACCTAACAACTACCCTTAATGCGTCTCGGGCAAAATAATTAAAAGTA
CAAAGCCTGAATTTGCCTAA

Downstream 100 bases:

>100_bases
GTAATTAACCTAGGCTTAATAGGATGAGTAACGAGGACTCACGCTTAATGAAGCTGCCTAGTCATATTGATTAACCTACG
GTTAACCTTAAATAGGCTTA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLAREIGVRLSIHAPYFINLCSDKD
STVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGCYNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLE
ETFKLVKEINNPQVVAVVDWGHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPL
AQELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA

Sequences:

>Translated_279_residues
MAKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLAREIGVRLSIHAPYFINLCSDKD
STVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGCYNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLE
ETFKLVKEINNPQVVAVVDWGHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPL
AQELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA
>Mature_278_residues
AKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLAREIGVRLSIHAPYFINLCSDKDS
TVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGCYNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLEE
TFKLVKEINNPQVVAVVDWGHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPLA
QELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA

Specific function: Unknown

COG id: COG0648

COG function: function code L; Endonuclease IV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001719
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 3.1.21.2

Molecular weight: Translated: 31242; Mature: 31110

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00729 AP_NUCLEASE_F2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLARE
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCEEEECCCHHHHHHHHH
IGVRLSIHAPYFINLCSDKDSTVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGC
HCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHCCCEEEEECCHHHCCCCCHHH
YNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLEETFKLVKEINNPQVVAVVDW
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC
GHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPL
CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHHHHEEECCCCCCCCCCCCCCCCCCHHHH
AQELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLARE
CEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCEEEECCCHHHHHHHHH
IGVRLSIHAPYFINLCSDKDSTVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGC
HCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHCCCEEEEECCHHHCCCCCHHH
YNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLEETFKLVKEINNPQVVAVVDW
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC
GHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPL
CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHHHHEEECCCCCCCCCCCCCCCCCCHHHH
AQELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]