| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041527
Identifier: 159041527
GI number: 159041527
Start: 1004898
End: 1005236
Strand: Reverse
Name: 159041527
Synonym: Cmaq_0957
Alternate gene names: NA
Gene position: 1005236-1004898 (Counterclockwise)
Preceding gene: 159041529
Following gene: 159041525
Centisome position: 48.39
GC content: 42.77
Gene sequence:
>339_bases ATGCAACCCACTGACCCGATAGTGGTTGAGTATATTAATGAGTTAATGAAGAGGGGGTTAAGGCAGTATGTTGACTTAAT AATACCGAGTGATGATGTTTTTAAGATAGGTAGGGAGTATGCTGAGACTAGGAGAAGTTACGCCGAGCTTCTTGATGCAC TTATTCAATACGTTAAGCCTAGGATTAATGGTGAGGTTGCTGAGCAGGTTGTGAGGAATTACTTGGGGAACGTGAACGTG GATTACGTTGATGTTGTAGCTAGGGGTATTGCGAAGTGGTATGTGGGTATTCTAAGATTATTCAATGTGGTCTCCTTCTC TGGATACCAGCCTCCTTAG
Upstream 100 bases:
>100_bases GAATACCCAGTATTGTAATTAACTTAACAGCAACATTAGTAATGCGGACGTAAATCACGCTTTAATAAAACTAATAAGCA TCGACTCCACGCATTAAGTA
Downstream 100 bases:
>100_bases GCTACTCATCCTTAGCCCTGACTCATTAACCAGCTTCTCAAGGTAATTAAAACCCATTATAATCACTGAGTCCTTCACCC TAATCCCATTGCTACCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MQPTDPIVVEYINELMKRGLRQYVDLIIPSDDVFKIGREYAETRRSYAELLDALIQYVKPRINGEVAEQVVRNYLGNVNV DYVDVVARGIAKWYVGILRLFNVVSFSGYQPP
Sequences:
>Translated_112_residues MQPTDPIVVEYINELMKRGLRQYVDLIIPSDDVFKIGREYAETRRSYAELLDALIQYVKPRINGEVAEQVVRNYLGNVNV DYVDVVARGIAKWYVGILRLFNVVSFSGYQPP >Mature_112_residues MQPTDPIVVEYINELMKRGLRQYVDLIIPSDDVFKIGREYAETRRSYAELLDALIQYVKPRINGEVAEQVVRNYLGNVNV DYVDVVARGIAKWYVGILRLFNVVSFSGYQPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12912; Mature: 12912
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTDPIVVEYINELMKRGLRQYVDLIIPSDDVFKIGREYAETRRSYAELLDALIQYVKP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RINGEVAEQVVRNYLGNVNVDYVDVVARGIAKWYVGILRLFNVVSFSGYQPP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQPTDPIVVEYINELMKRGLRQYVDLIIPSDDVFKIGREYAETRRSYAELLDALIQYVKP CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RINGEVAEQVVRNYLGNVNVDYVDVVARGIAKWYVGILRLFNVVSFSGYQPP CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA