Click here to switch to the map view.

The map label for this gene is yccW [C]

Identifier: 159041525

GI number: 159041525

Start: 1003208

End: 1003957

Strand: Reverse

Name: yccW [C]

Synonym: Cmaq_0955

Alternate gene names: 159041525

Gene position: 1003957-1003208 (Counterclockwise)

Preceding gene: 159041527

Following gene: 159041523

Centisome position: 48.32

GC content: 45.33

Gene sequence:

>750_bases
TTGAGGATCATTAGCTTCAAGCCTAAATCAGAAACCACATACACTTACTGGGATATTAATGAGGAGTCATTAGTAATGAA
GTATAGGCAGGAGCAGTGTAAGCCTCTCTTCACTAGGAGTGGGGAGTCACTAATTAGACTGTACATTGAGTCAAATGGGC
ATAGTTACAAGTTATGCTCCTCAAATAAGGGGTGGGCGCCAACATTGGTTATTGATGGGATAGTGATGCACACTATGATG
AGTGACCCATTAAGCTACAGTTACGTTAAGTTAAGGGGAGTGAGGGTGAGGGGGATTGTCTTAGACTGCTGCACTGGATT
AGGCTACACCACACTGGTGGCGCTTAGGAAGGGTGCTAGGAGGGTTGTGACCGTGGAGGCTGATGATAATGTAATTGAAC
TAGCTAGGTATAATCCCTGGAGCAGCCACTTAATGGACCCTAGGGTTGATTTGGTGCTTGGGGATATTTATGAAGCCGCT
GAGTGGATTAGGGATTCAGTATTCGACCTCATAATCCATGACCCACCCAGGCCCACTAAAAGATTCACAACCCTATACTC
CGAGGAGCTTTACAGGATTTACAGTAGGTTATTGAAGAGGGGTGGTTTACTGTACCATTATGTACCAATGACTGGGATTA
AGTATAGGGGACGTAGTGTTAAGCGTGGTGTTATTGAGAGGTTAAGGAGAGCGGGCTTCACCATAATTAGTGAGAATGAG
TATGGTTTACTAGCCAGGAGGGTGGGCTAG

Upstream 100 bases:

>100_bases
TCTCCTAACCTTTAACTTAAGCTCCCTCATTACTGGTGCTTAAGCTAACCAATACACGTGAGCTTTAAAACCGTTTTTCT
AAAATACCCAGGGTTAAGCC

Downstream 100 bases:

>100_bases
TGGGGGTTTTAGTGCCAGATATTAAGTATATCAATCTCAATGGGGGTAACCTTAATGCCTAATGTTCCTGATACTGATGG
TTCCGTACCCTCACCGGTAA

Product: methyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRIISFKPKSETTYTYWDINEESLVMKYRQEQCKPLFTRSGESLIRLYIESNGHSYKLCSSNKGWAPTLVIDGIVMHTMM
SDPLSYSYVKLRGVRVRGIVLDCCTGLGYTTLVALRKGARRVVTVEADDNVIELARYNPWSSHLMDPRVDLVLGDIYEAA
EWIRDSVFDLIIHDPPRPTKRFTTLYSEELYRIYSRLLKRGGLLYHYVPMTGIKYRGRSVKRGVIERLRRAGFTIISENE
YGLLARRVG

Sequences:

>Translated_249_residues
MRIISFKPKSETTYTYWDINEESLVMKYRQEQCKPLFTRSGESLIRLYIESNGHSYKLCSSNKGWAPTLVIDGIVMHTMM
SDPLSYSYVKLRGVRVRGIVLDCCTGLGYTTLVALRKGARRVVTVEADDNVIELARYNPWSSHLMDPRVDLVLGDIYEAA
EWIRDSVFDLIIHDPPRPTKRFTTLYSEELYRIYSRLLKRGGLLYHYVPMTGIKYRGRSVKRGVIERLRRAGFTIISENE
YGLLARRVG
>Mature_249_residues
MRIISFKPKSETTYTYWDINEESLVMKYRQEQCKPLFTRSGESLIRLYIESNGHSYKLCSSNKGWAPTLVIDGIVMHTMM
SDPLSYSYVKLRGVRVRGIVLDCCTGLGYTTLVALRKGARRVVTVEADDNVIELARYNPWSSHLMDPRVDLVLGDIYEAA
EWIRDSVFDLIIHDPPRPTKRFTTLYSEELYRIYSRLLKRGGLLYHYVPMTGIKYRGRSVKRGVIERLRRAGFTIISENE
YGLLARRVG

Specific function: Unknown

COG id: COG2521

COG function: function code R; Predicted archaeal methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28819; Mature: 28819

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIISFKPKSETTYTYWDINEESLVMKYRQEQCKPLFTRSGESLIRLYIESNGHSYKLCS
CEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCEEEEEEEECCCCEEEEEC
SNKGWAPTLVIDGIVMHTMMSDPLSYSYVKLRGVRVRGIVLDCCTGLGYTTLVALRKGAR
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEHEEHHCCCCHHHHHHHHHCCC
RVVTVEADDNVIELARYNPWSSHLMDPRVDLVLGDIYEAAEWIRDSVFDLIIHDPPRPTK
EEEEEECCCCEEEEEECCCHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHEEECCCCCCHH
RFTTLYSEELYRIYSRLLKRGGLLYHYVPMTGIKYRGRSVKRGVIERLRRAGFTIISENE
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHCCCEEEECCC
YGLLARRVG
CCEEEECCC
>Mature Secondary Structure
MRIISFKPKSETTYTYWDINEESLVMKYRQEQCKPLFTRSGESLIRLYIESNGHSYKLCS
CEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHCCCCEEEEEEEECCCCEEEEEC
SNKGWAPTLVIDGIVMHTMMSDPLSYSYVKLRGVRVRGIVLDCCTGLGYTTLVALRKGAR
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECEEEEEEHEEHHCCCCHHHHHHHHHCCC
RVVTVEADDNVIELARYNPWSSHLMDPRVDLVLGDIYEAAEWIRDSVFDLIIHDPPRPTK
EEEEEECCCCEEEEEECCCHHHHCCCCCHHHEEHHHHHHHHHHHHHHHHEEECCCCCCHH
RFTTLYSEELYRIYSRLLKRGGLLYHYVPMTGIKYRGRSVKRGVIERLRRAGFTIISENE
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHHHHHHHHCCCEEEECCC
YGLLARRVG
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]