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The map label for this gene is 159041488

Identifier: 159041488

GI number: 159041488

Start: 962094

End: 962822

Strand: Reverse

Name: 159041488

Synonym: Cmaq_0917

Alternate gene names: NA

Gene position: 962822-962094 (Counterclockwise)

Preceding gene: 159041489

Following gene: 159041486

Centisome position: 46.34

GC content: 38.13

Gene sequence:

>729_bases
ATGTTAATAATGCAGGTTAATTACCTTGATATTAGTCGTGGATTCACTTATGTTGAGTTTGATTATGTTCATAAGGTTGA
TTGGACGTATAAGGCCAGTGGCTATGAATTCAGTTACAATGTTGTTGAATCATACATTAATGAAACTGGGAAGTACGCCC
TAGAGTTCGCTATACTTAGGGTTAATGATAAGGCAACGCTTAGGGGCATACTGAATATTATTAGAAGTGATGGTAATGTT
AAGGAGGTTATTAAAGTGACACCATTAAACACAGGGTACCCTAAGAGGGTTAGCATTATCATAAGGGTTAAGTTAGATAA
TTCCACTAGGTTTAGGGCCTATAGGCTAGGTGGTATTGAGGTTAAGGACACTATAATTAATGGCGTGGAGAATTGGGGAT
TCGCATTACCAAGTTCAAGTGAGGTTAAGAGGCTTAAGCAATACTTAACAATGGGTGGTGAGGTTAAGGATATGAGAACC
AGGCGTATTAACGCTGATGAATTAATATACATGACCATCCACAGTAAATTAACCCCATTCCTAAGCAAGGGTGAGTTAAA
AGTATTGAAGACGGCGTATGAATTAGGATACCTAAGTGAACCAAGGAGAACCACGTTAAGTAAGGTCGCGGACACATTAG
GATTATCCACCACCACTGTGAATTATGAAATAAGGAGGGGAATATACAAGCTACTAACCCTAATACTAAGAGGAATAATT
AACACCTAA

Upstream 100 bases:

>100_bases
TTATTAACTTGAATTACCTATGGTGTCATTAAATTATGTTGAGTAATTCATGTTTACTTAATGATTTTTGAAGTAATGCT
TATTAAGTATTCTAGTGTTT

Downstream 100 bases:

>100_bases
TACCGGTGACCAATCAATGAGGATCGCATCCACACCAGCCCAACTTAACCAAAGCGCGTCTTGAACTACTATTGCCGTCT
TATTACTCCATAGTGCAGTA

Product: bacterio-opsin activator

Products: NA

Alternate protein names: Bacterio-Opsin Activator HTH Domain-Containing Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLIMQVNYLDISRGFTYVEFDYVHKVDWTYKASGYEFSYNVVESYINETGKYALEFAILRVNDKATLRGILNIIRSDGNV
KEVIKVTPLNTGYPKRVSIIIRVKLDNSTRFRAYRLGGIEVKDTIINGVENWGFALPSSSEVKRLKQYLTMGGEVKDMRT
RRINADELIYMTIHSKLTPFLSKGELKVLKTAYELGYLSEPRRTTLSKVADTLGLSTTTVNYEIRRGIYKLLTLILRGII
NT

Sequences:

>Translated_242_residues
MLIMQVNYLDISRGFTYVEFDYVHKVDWTYKASGYEFSYNVVESYINETGKYALEFAILRVNDKATLRGILNIIRSDGNV
KEVIKVTPLNTGYPKRVSIIIRVKLDNSTRFRAYRLGGIEVKDTIINGVENWGFALPSSSEVKRLKQYLTMGGEVKDMRT
RRINADELIYMTIHSKLTPFLSKGELKVLKTAYELGYLSEPRRTTLSKVADTLGLSTTTVNYEIRRGIYKLLTLILRGII
NT
>Mature_242_residues
MLIMQVNYLDISRGFTYVEFDYVHKVDWTYKASGYEFSYNVVESYINETGKYALEFAILRVNDKATLRGILNIIRSDGNV
KEVIKVTPLNTGYPKRVSIIIRVKLDNSTRFRAYRLGGIEVKDTIINGVENWGFALPSSSEVKRLKQYLTMGGEVKDMRT
RRINADELIYMTIHSKLTPFLSKGELKVLKTAYELGYLSEPRRTTLSKVADTLGLSTTTVNYEIRRGIYKLLTLILRGII
NT

Specific function: Unknown

COG id: COG3413

COG function: function code R; Predicted DNA binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27748; Mature: 27748

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIMQVNYLDISRGFTYVEFDYVHKVDWTYKASGYEFSYNVVESYINETGKYALEFAILR
CEEEEEEEEECCCCEEEEEEEEEEEECEEEECCCEEEEHHHHHHHHHHCCCEEEEEEEEE
VNDKATLRGILNIIRSDGNVKEVIKVTPLNTGYPKRVSIIIRVKLDNSTRFRAYRLGGIE
ECCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEECCEE
VKDTIINGVENWGFALPSSSEVKRLKQYLTMGGEVKDMRTRRINADELIYMTIHSKLTPF
EHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCC
LSKGELKVLKTAYELGYLSEPRRTTLSKVADTLGLSTTTVNYEIRRGIYKLLTLILRGII
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHC
NT
CC
>Mature Secondary Structure
MLIMQVNYLDISRGFTYVEFDYVHKVDWTYKASGYEFSYNVVESYINETGKYALEFAILR
CEEEEEEEEECCCCEEEEEEEEEEEECEEEECCCEEEEHHHHHHHHHHCCCEEEEEEEEE
VNDKATLRGILNIIRSDGNVKEVIKVTPLNTGYPKRVSIIIRVKLDNSTRFRAYRLGGIE
ECCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEECCEE
VKDTIINGVENWGFALPSSSEVKRLKQYLTMGGEVKDMRTRRINADELIYMTIHSKLTPF
EHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCCCC
LSKGELKVLKTAYELGYLSEPRRTTLSKVADTLGLSTTTVNYEIRRGIYKLLTLILRGII
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHC
NT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA