| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is pfpI [H]
Identifier: 159041453
GI number: 159041453
Start: 925002
End: 925577
Strand: Reverse
Name: pfpI [H]
Synonym: Cmaq_0881
Alternate gene names: 159041453
Gene position: 925577-925002 (Counterclockwise)
Preceding gene: 159041457
Following gene: 159041452
Centisome position: 44.55
GC content: 47.22
Gene sequence:
>576_bases ATGGCTAAGGCTAGGATTCTAATAATAGCTGGAGATGCCGTTGAAGCTCTTGAACTCTTCTACCCATACTATAGGCTTAA GGAGGAGGGGTGGGATGTTGACGTGGCGGCTCCAAGTAGGAAGGATTTAAGGACTGTGGTTCATGATTTTGAACCAGGGT GGGAAACTTACAGTGAGAAACCTGGTTACCTCTTTAAGTGGGTTACTAAAACACTCTCCGAGGTTAAGCCTGAGGAGTAC GATGGGTTAGTTATACCAGGGGGTAGAATGCCTGAGTACGTTAGGGTTGTTGCCTCAGAGGATGTTAAGCGCATTGTAAG GCACTTCTTTGAGACTAAGAAACCTGTGGCAGCAATATGCCATGCACCTCAAATACTGGCTGCAGCCGGCGTGGTTAAGG GTAGAAGAATGACTAGCTACATAGCCGTAAGACCCGAGGTTGAGAATAATGGAGGAATATGGGTTGATGAGGAGGTTGTG GTAGATGGGAACCTAGTCACGTCTAGGGCATGGCCTGATAACCCAGCTTGGATGAGGGAATTCATAAAGCTAGTAAAGGC TAGGATAGGTGGTTAG
Upstream 100 bases:
>100_bases CATATAGTTAGGAAAAATATCCTACTTATAAAGATTACCCATCATACCAAACCCACATATCTGCATAAAGCTTAAATATT CTCAAAAATTATTATTAATC
Downstream 100 bases:
>100_bases TTAGGTAATTTACTTAAAGACCATTAAACACCTTAATCTTAAATTATTTCAATATGCTCTTAAGGTCATTAGGTTCCTGG TATAATTCACTGTTTAGTAT
Product: PfpI family intracellular peptidase
Products: NA
Alternate protein names: Intracellular protease I [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAKARILIIAGDAVEALELFYPYYRLKEEGWDVDVAAPSRKDLRTVVHDFEPGWETYSEKPGYLFKWVTKTLSEVKPEEY DGLVIPGGRMPEYVRVVASEDVKRIVRHFFETKKPVAAICHAPQILAAAGVVKGRRMTSYIAVRPEVENNGGIWVDEEVV VDGNLVTSRAWPDNPAWMREFIKLVKARIGG
Sequences:
>Translated_191_residues MAKARILIIAGDAVEALELFYPYYRLKEEGWDVDVAAPSRKDLRTVVHDFEPGWETYSEKPGYLFKWVTKTLSEVKPEEY DGLVIPGGRMPEYVRVVASEDVKRIVRHFFETKKPVAAICHAPQILAAAGVVKGRRMTSYIAVRPEVENNGGIWVDEEVV VDGNLVTSRAWPDNPAWMREFIKLVKARIGG >Mature_190_residues AKARILIIAGDAVEALELFYPYYRLKEEGWDVDVAAPSRKDLRTVVHDFEPGWETYSEKPGYLFKWVTKTLSEVKPEEYD GLVIPGGRMPEYVRVVASEDVKRIVRHFFETKKPVAAICHAPQILAAAGVVKGRRMTSYIAVRPEVENNGGIWVDEEVVV DGNLVTSRAWPDNPAWMREFIKLVKARIGG
Specific function: Highly stable protease. Although the physiological function is unclear it is the dominant protease in P.furiosus [H]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PfpI endopeptidase domain [H]
Homologues:
Organism=Escherichia coli, GI87082219, Length=166, Percent_Identity=36.144578313253, Blast_Score=102, Evalue=2e-23, Organism=Drosophila melanogaster, GI28571932, Length=181, Percent_Identity=29.8342541436464, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006286 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: NA
Molecular weight: Translated: 21618; Mature: 21487
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKARILIIAGDAVEALELFYPYYRLKEEGWDVDVAAPSRKDLRTVVHDFEPGWETYSEK CCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC PGYLFKWVTKTLSEVKPEEYDGLVIPGGRMPEYVRVVASEDVKRIVRHFFETKKPVAAIC CCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH HAPQILAAAGVVKGRRMTSYIAVRPEVENNGGIWVDEEVVVDGNLVTSRAWPDNPAWMRE CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCEEEECCCEEECCCCCCCHHHHHH FIKLVKARIGG HHHHHHHHHCC >Mature Secondary Structure AKARILIIAGDAVEALELFYPYYRLKEEGWDVDVAAPSRKDLRTVVHDFEPGWETYSEK CCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC PGYLFKWVTKTLSEVKPEEYDGLVIPGGRMPEYVRVVASEDVKRIVRHFFETKKPVAAIC CCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH HAPQILAAAGVVKGRRMTSYIAVRPEVENNGGIWVDEEVVVDGNLVTSRAWPDNPAWMRE CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCEEEECCCEEECCCCCCCHHHHHH FIKLVKARIGG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8626329 [H]