| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is mat
Identifier: 159041438
GI number: 159041438
Start: 909732
End: 910958
Strand: Reverse
Name: mat
Synonym: Cmaq_0865
Alternate gene names: 159041438
Gene position: 910958-909732 (Counterclockwise)
Preceding gene: 159041439
Following gene: 159041437
Centisome position: 43.85
GC content: 44.34
Gene sequence:
>1227_bases ATGGCCAGGAACATAGTAGTCTCAGGGATAAGGAGACCTCCAACTGAGGATTTACCGGTTGAGTTAGTTGAGAGGAAGGG GTTAGGTCACCCTGACTACATTGCTGACTCAATATCCGAGTACGTTAGTAGGGAGTTATCGAAATACTACATGGAGAACT TCGGCACAATACTCCATCATAATGTTGATAAGGTTCTAGTAATTGGAGGCAACGCCCAGGTTAAATTCGGTGGAGGAGAG ATAATAGAACCAATTAGGATAATTGTATCCGGTAGAGCGACCACTGAGGTTAAGTCAAGTACAGGGGTGGTTAAGGTACC CATAGGTAGTATTATTCTATCAGCGGCGAGGAAATTCATAATAGATAACTTCCGATTCCTTAACCCGGATCAACACCTCG TAATAGATTATAAGGTTGGGCAAGGGTCAGTTGACTTAGTTGGCGTCTATGAACTTGGAGTATCCAGTGGAGGGGTGCCG CTTGCAAATGATACATCCATAGGGGTTGGTTTCGCACCATTAACAGTAACAGAGAGGCTCGTCTACGAGACTGAGAGACT ACTTAACTCAAGGGAGTTTAAGGCAAGGTACCCTGAGGTGGGTGAGGATGTTAAGGTAATGGGCCTTAGGAGGGGTAGGA AGATAACGCTCACAGTTGCCTCGGCCTTAGTTTCAAGGCTCATTAAGGATAAGGACCATTACATAAGTGTTAAGGAGGAT GTTGTGAACGCTATCTACGATAATGCGGTTAAACTGGCTAATGGATATGAGGTGGAGGTTCACTTAAACACCGCTGATAA TCCTGAACATGGGATATACTACCTCACGTACACCGGTACCTCTGCTGAGCATGGGGATGATGGAATGACCGGTAGGGGTA ATAGGGCTAATGGGTTAATAACACCAATGAGGCCAATGTCCATGGAGGCTACCGCAGGCAAGAACCCAGTATCACACATA GGTAAAATATACTACGTGTTAGCCAACATGATAGCTAAGCGTATTCACGATGAGGTTAAGGGTACTAGGGAGGTCTACGT ATACTTACTAAGCCAAATAGGTAAACCCATTGATAACCCACTGATAGCTAACGTTGAAATAATAACTAATGAGGGTGAAG TAACCAGTGAAATGAAGAGGGAAGCCGAGGCTATAACTGATGAGGAGATTAGTAGGGTAACAAGGTTAACAAGCATGTTC GTTAAGGGTGAAATAACACCATTCTAA
Upstream 100 bases:
>100_bases CACTAGGACTAATCAAGTGATTGTTAGGTATGGTAAAGTACTAATAAGGGGGAATCAAGTACTCTACGTATCCGTAAGGA ATGAATTAGAGTGACCCAAT
Downstream 100 bases:
>100_bases GCCAAGGTAGGTCAGCCTTTTAAATTAATACCGTAATTTTCTAAATCAACATAATGCCAATGATCTTAAGCCACTGGGGA GTAATCCTTATAAATAAGTT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; Methionine adenosyltransferase
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MARNIVVSGIRRPPTEDLPVELVERKGLGHPDYIADSISEYVSRELSKYYMENFGTILHHNVDKVLVIGGNAQVKFGGGE IIEPIRIIVSGRATTEVKSSTGVVKVPIGSIILSAARKFIIDNFRFLNPDQHLVIDYKVGQGSVDLVGVYELGVSSGGVP LANDTSIGVGFAPLTVTERLVYETERLLNSREFKARYPEVGEDVKVMGLRRGRKITLTVASALVSRLIKDKDHYISVKED VVNAIYDNAVKLANGYEVEVHLNTADNPEHGIYYLTYTGTSAEHGDDGMTGRGNRANGLITPMRPMSMEATAGKNPVSHI GKIYYVLANMIAKRIHDEVKGTREVYVYLLSQIGKPIDNPLIANVEIITNEGEVTSEMKREAEAITDEEISRVTRLTSMF VKGEITPF
Sequences:
>Translated_408_residues MARNIVVSGIRRPPTEDLPVELVERKGLGHPDYIADSISEYVSRELSKYYMENFGTILHHNVDKVLVIGGNAQVKFGGGE IIEPIRIIVSGRATTEVKSSTGVVKVPIGSIILSAARKFIIDNFRFLNPDQHLVIDYKVGQGSVDLVGVYELGVSSGGVP LANDTSIGVGFAPLTVTERLVYETERLLNSREFKARYPEVGEDVKVMGLRRGRKITLTVASALVSRLIKDKDHYISVKED VVNAIYDNAVKLANGYEVEVHLNTADNPEHGIYYLTYTGTSAEHGDDGMTGRGNRANGLITPMRPMSMEATAGKNPVSHI GKIYYVLANMIAKRIHDEVKGTREVYVYLLSQIGKPIDNPLIANVEIITNEGEVTSEMKREAEAITDEEISRVTRLTSMF VKGEITPF >Mature_407_residues ARNIVVSGIRRPPTEDLPVELVERKGLGHPDYIADSISEYVSRELSKYYMENFGTILHHNVDKVLVIGGNAQVKFGGGEI IEPIRIIVSGRATTEVKSSTGVVKVPIGSIILSAARKFIIDNFRFLNPDQHLVIDYKVGQGSVDLVGVYELGVSSGGVPL ANDTSIGVGFAPLTVTERLVYETERLLNSREFKARYPEVGEDVKVMGLRRGRKITLTVASALVSRLIKDKDHYISVKEDV VNAIYDNAVKLANGYEVEVHLNTADNPEHGIYYLTYTGTSAEHGDDGMTGRGNRANGLITPMRPMSMEATAGKNPVSHIG KIYYVLANMIAKRIHDEVKGTREVYVYLLSQIGKPIDNPLIANVEIITNEGEVTSEMKREAEAITDEEISRVTRLTSMFV KGEITPF
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP
COG id: COG1812
COG function: function code E; Archaeal S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase 2 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): METK_CALMQ (A8MD44)
Other databases:
- EMBL: CP000852 - RefSeq: YP_001540690.1 - GeneID: 5708918 - GenomeReviews: CP000852_GR - KEGG: cma:Cmaq_0865 - HOGENOM: HBG297280 - OMA: RPMSMEA - ProtClustDB: PRK04439 - BioCyc: CMAQ397948:CMAQ_0865-MONOMER - HAMAP: MF_00136 - InterPro: IPR002795 - ProDom: PD011777
Pfam domain/function: PF01941 AdoMet_Synthase
EC number: =2.5.1.6
Molecular weight: Translated: 44935; Mature: 44804
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNIVVSGIRRPPTEDLPVELVERKGLGHPDYIADSISEYVSRELSKYYMENFGTILHH CCCCEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC NVDKVLVIGGNAQVKFGGGEIIEPIRIIVSGRATTEVKSSTGVVKVPIGSIILSAARKFI CCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEECHHHHHHHHHHHHH IDNFRFLNPDQHLVIDYKVGQGSVDLVGVYELGVSSGGVPLANDTSIGVGFAPLTVTERL HHCCEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHH VYETERLLNSREFKARYPEVGEDVKVMGLRRGRKITLTVASALVSRLIKDKDHYISVKED HHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCCCCEEEHHHH VVNAIYDNAVKLANGYEVEVHLNTADNPEHGIYYLTYTGTSAEHGDDGMTGRGNRANGLI HHHHHHHCCEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC TPMRPMSMEATAGKNPVSHIGKIYYVLANMIAKRIHDEVKGTREVYVYLLSQIGKPIDNP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC LIANVEIITNEGEVTSEMKREAEAITDEEISRVTRLTSMFVKGEITPF EEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARNIVVSGIRRPPTEDLPVELVERKGLGHPDYIADSISEYVSRELSKYYMENFGTILHH CCCEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC NVDKVLVIGGNAQVKFGGGEIIEPIRIIVSGRATTEVKSSTGVVKVPIGSIILSAARKFI CCCEEEEECCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEECHHHHHHHHHHHHH IDNFRFLNPDQHLVIDYKVGQGSVDLVGVYELGVSSGGVPLANDTSIGVGFAPLTVTERL HHCCEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHH VYETERLLNSREFKARYPEVGEDVKVMGLRRGRKITLTVASALVSRLIKDKDHYISVKED HHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCCCCEEEHHHH VVNAIYDNAVKLANGYEVEVHLNTADNPEHGIYYLTYTGTSAEHGDDGMTGRGNRANGLI HHHHHHHCCEEECCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC TPMRPMSMEATAGKNPVSHIGKIYYVLANMIAKRIHDEVKGTREVYVYLLSQIGKPIDNP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC LIANVEIITNEGEVTSEMKREAEAITDEEISRVTRLTSMFVKGEITPF EEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA