Click here to switch to the map view.

The map label for this gene is 159041418

Identifier: 159041418

GI number: 159041418

Start: 888487

End: 889743

Strand: Reverse

Name: 159041418

Synonym: Cmaq_0845

Alternate gene names: NA

Gene position: 889743-888487 (Counterclockwise)

Preceding gene: 159041422

Following gene: 159041417

Centisome position: 42.83

GC content: 44.71

Gene sequence:

>1257_bases
ATGAACATATCACCATTAGTGTGGTTCGTGGTTGCTTGGTTCGTCTTCATTGGGTTAGTTAAGCTTTTACTGGGGAATAG
GGTTAGGATTTACTACTACATTGCTTTAATGGCTAGGAGCAGTGGTGTTGAGAGGGTTCTTAGGCCCCTGGCTGATTTAA
TAGAGGGTGTTCCTGCAATAGTCATATTCGTGATTGTTGTGGTATTCTTCGCATTAGCCATGGTTTACGCGGTACCAGTC
CTATTGCCTATGCCTATTCAGGTTATAGGTGAATTAGTGGGCTTTGTACCATCATTCATTAGAATACTGGGTATTAACAT
AGCCGCAACTGTAAGCGTCCTAACGAGCCTACACACTGTATCAGGTCAACAGGCGGCAACTCAATTGGTGCAGAGTAGGT
TCACACCAGCCACACCGTTAATACCTGGTGTCACAATTAGCGTTAACGTGTTCATAATAGTGTTAATAGCCATAGGCATA
AGTATACTTGTTCACGAAGTCTCCCACGGCATAGTTGCACTTAGGTATGGGGGTAGGATAAAGTCAGGTGGCGTATTCCT
ATCACTCTTCATACTCTACGGTGGTTTCGTTGAAGTTGATGAGGTTGACCTTAGGAAGAGGGCTGGGTTAAGGGGTGTGT
TAGCCATGTTATCCGCAGGGGTTTTCGCCAACATGATCCTATCAATAATTGCCATAGGCCTAATGTACCTAGCCCTAATA
CCGGCGCTTCAACCATACTTATCAGGAATAGTCATAACGAGTATTGTTAAGGATTCACCAGCCTTCTACGCCAACATACC
GGCCAATAGCCTACTCCTCGCAGTAAATGGGAAGCCTATAATATCATCACTGACTTTACTTTACGTGCTTGAGGGCCTTA
AGCCAGGTAGTCAAGTCACCTTAACGATACTTCACTCAGGCATAATACACACCTACACGATAGTCACCTCCAGTAACCCA
AGTGACCCAAGCCTGCCCTTCATAGGCATTACCATTGGTGACAGGTTATTTTACCAATTCATATACTGGCTATGGACAAT
AAACGTGGTTATAATACTACTTAACACCATGCCCGCGTGGCCTCTTGATGGTGGCCAATTCCTATACCACATACTCTTAA
GCATACCTGGATTTAAGGAGGATTGGGCTAATTGGATTATGTACATCATTAGCGCTGCCTTATGGGTCCTCTTCGTATTC
ACACTACTAGTAAGCTTATCATCAGGTCTCTGGAGGATTGCGGTGACCCCACCGTGA

Upstream 100 bases:

>100_bases
GAATCCAGTAGCCTATTGTATTAATATGGAGATGAGGTGAAGAAACGGTTAGGATTTACTTGGGAATAAAATATATTAAG
CCAAGGATATGGGATCAGTG

Downstream 100 bases:

>100_bases
AGGGGGAGTTAAGGTACTCGTTGATAATAGCATTAATACTAGTGGTTATGACGATAGCGGTGTCAGCAGCAACCCCCGTT
GAATTATTATTCTCAGTGGA

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNISPLVWFVVAWFVFIGLVKLLLGNRVRIYYYIALMARSSGVERVLRPLADLIEGVPAIVIFVIVVVFFALAMVYAVPV
LLPMPIQVIGELVGFVPSFIRILGINIAATVSVLTSLHTVSGQQAATQLVQSRFTPATPLIPGVTISVNVFIIVLIAIGI
SILVHEVSHGIVALRYGGRIKSGGVFLSLFILYGGFVEVDEVDLRKRAGLRGVLAMLSAGVFANMILSIIAIGLMYLALI
PALQPYLSGIVITSIVKDSPAFYANIPANSLLLAVNGKPIISSLTLLYVLEGLKPGSQVTLTILHSGIIHTYTIVTSSNP
SDPSLPFIGITIGDRLFYQFIYWLWTINVVIILLNTMPAWPLDGGQFLYHILLSIPGFKEDWANWIMYIISAALWVLFVF
TLLVSLSSGLWRIAVTPP

Sequences:

>Translated_418_residues
MNISPLVWFVVAWFVFIGLVKLLLGNRVRIYYYIALMARSSGVERVLRPLADLIEGVPAIVIFVIVVVFFALAMVYAVPV
LLPMPIQVIGELVGFVPSFIRILGINIAATVSVLTSLHTVSGQQAATQLVQSRFTPATPLIPGVTISVNVFIIVLIAIGI
SILVHEVSHGIVALRYGGRIKSGGVFLSLFILYGGFVEVDEVDLRKRAGLRGVLAMLSAGVFANMILSIIAIGLMYLALI
PALQPYLSGIVITSIVKDSPAFYANIPANSLLLAVNGKPIISSLTLLYVLEGLKPGSQVTLTILHSGIIHTYTIVTSSNP
SDPSLPFIGITIGDRLFYQFIYWLWTINVVIILLNTMPAWPLDGGQFLYHILLSIPGFKEDWANWIMYIISAALWVLFVF
TLLVSLSSGLWRIAVTPP
>Mature_418_residues
MNISPLVWFVVAWFVFIGLVKLLLGNRVRIYYYIALMARSSGVERVLRPLADLIEGVPAIVIFVIVVVFFALAMVYAVPV
LLPMPIQVIGELVGFVPSFIRILGINIAATVSVLTSLHTVSGQQAATQLVQSRFTPATPLIPGVTISVNVFIIVLIAIGI
SILVHEVSHGIVALRYGGRIKSGGVFLSLFILYGGFVEVDEVDLRKRAGLRGVLAMLSAGVFANMILSIIAIGLMYLALI
PALQPYLSGIVITSIVKDSPAFYANIPANSLLLAVNGKPIISSLTLLYVLEGLKPGSQVTLTILHSGIIHTYTIVTSSNP
SDPSLPFIGITIGDRLFYQFIYWLWTINVVIILLNTMPAWPLDGGQFLYHILLSIPGFKEDWANWIMYIISAALWVLFVF
TLLVSLSSGLWRIAVTPP

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.solfataricus C04034 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR001193
- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 45542; Mature: 45542

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00435 PEROXIDASE_1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISPLVWFVVAWFVFIGLVKLLLGNRVRIYYYIALMARSSGVERVLRPLADLIEGVPAI
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
VIFVIVVVFFALAMVYAVPVLLPMPIQVIGELVGFVPSFIRILGINIAATVSVLTSLHTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGQQAATQLVQSRFTPATPLIPGVTISVNVFIIVLIAIGISILVHEVSHGIVALRYGGRI
CCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEE
KSGGVFLSLFILYGGFVEVDEVDLRKRAGLRGVLAMLSAGVFANMILSIIAIGLMYLALI
CCCHHHHHHHHHHCCCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALQPYLSGIVITSIVKDSPAFYANIPANSLLLAVNGKPIISSLTLLYVLEGLKPGSQVT
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEE
LTILHSGIIHTYTIVTSSNPSDPSLPFIGITIGDRLFYQFIYWLWTINVVIILLNTMPAW
EHHHHCCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLDGGQFLYHILLSIPGFKEDWANWIMYIISAALWVLFVFTLLVSLSSGLWRIAVTPP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MNISPLVWFVVAWFVFIGLVKLLLGNRVRIYYYIALMARSSGVERVLRPLADLIEGVPAI
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
VIFVIVVVFFALAMVYAVPVLLPMPIQVIGELVGFVPSFIRILGINIAATVSVLTSLHTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGQQAATQLVQSRFTPATPLIPGVTISVNVFIIVLIAIGISILVHEVSHGIVALRYGGRI
CCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEE
KSGGVFLSLFILYGGFVEVDEVDLRKRAGLRGVLAMLSAGVFANMILSIIAIGLMYLALI
CCCHHHHHHHHHHCCCCEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALQPYLSGIVITSIVKDSPAFYANIPANSLLLAVNGKPIISSLTLLYVLEGLKPGSQVT
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEE
LTILHSGIIHTYTIVTSSNPSDPSLPFIGITIGDRLFYQFIYWLWTINVVIILLNTMPAW
EHHHHCCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLDGGQFLYHILLSIPGFKEDWANWIMYIISAALWVLFVFTLLVSLSSGLWRIAVTPP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]