| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041417
Identifier: 159041417
GI number: 159041417
Start: 887993
End: 888490
Strand: Reverse
Name: 159041417
Synonym: Cmaq_0844
Alternate gene names: NA
Gene position: 888490-887993 (Counterclockwise)
Preceding gene: 159041418
Following gene: 159041416
Centisome position: 42.77
GC content: 40.56
Gene sequence:
>498_bases GTGAAGGGGGAGTTAAGGTACTCGTTGATAATAGCATTAATACTAGTGGTTATGACGATAGCGGTGTCAGCAGCAACCCC CGTTGAATTATTATTCTCAGTGGAGTCTAGGTTAATAGCCCCAAACGGTAACTTAATATACGTAGTCTATAATGATAACT CAATATCCTGGGTAACCTACACCCCATTCTACATCTACGCCTGGAGGTTCTCAGCAATAATGTTCCTCCTCTGGATAGCA GTAATCATAATATACGTTATCAAACCCCTTAAGACCGCGGACGTATTATCAATAATACTAGCAGTAATATTCGCTGCGTC GGAGTACGTTTACCTATACTCGATTGGAGCTAAGGTAATTATGCTCCCCTTAGCATACATTCTCTACACAATAGGTAAAC CATTACTGTTCATTGATGTTGGGCAATTAGCCTTAATTTACGCACTCTGGAGGGCTTTTAAAAACAACCTAATCAAGATT AAGCGTGGAGGTAAGTGA
Upstream 100 bases:
>100_bases GGATTATGTACATCATTAGCGCTGCCTTATGGGTCCTCTTCGTATTCACACTACTAGTAAGCTTATCATCAGGTCTCTGG AGGATTGCGGTGACCCCACC
Downstream 100 bases:
>100_bases GGAGAGGGTCATTAAGCTAAGCACTGTGTTAAGGGAATTAAGCCTAAGCGATGTATTAGCCTTCGAGGAGAGGGATCCAC AATTCATTGTTGTTAAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKGELRYSLIIALILVVMTIAVSAATPVELLFSVESRLIAPNGNLIYVVYNDNSISWVTYTPFYIYAWRFSAIMFLLWIA VIIIYVIKPLKTADVLSIILAVIFAASEYVYLYSIGAKVIMLPLAYILYTIGKPLLFIDVGQLALIYALWRAFKNNLIKI KRGGK
Sequences:
>Translated_165_residues MKGELRYSLIIALILVVMTIAVSAATPVELLFSVESRLIAPNGNLIYVVYNDNSISWVTYTPFYIYAWRFSAIMFLLWIA VIIIYVIKPLKTADVLSIILAVIFAASEYVYLYSIGAKVIMLPLAYILYTIGKPLLFIDVGQLALIYALWRAFKNNLIKI KRGGK >Mature_165_residues MKGELRYSLIIALILVVMTIAVSAATPVELLFSVESRLIAPNGNLIYVVYNDNSISWVTYTPFYIYAWRFSAIMFLLWIA VIIIYVIKPLKTADVLSIILAVIFAASEYVYLYSIGAKVIMLPLAYILYTIGKPLLFIDVGQLALIYALWRAFKNNLIKI KRGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18635; Mature: 18635
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGELRYSLIIALILVVMTIAVSAATPVELLFSVESRLIAPNGNLIYVVYNDNSISWVTY CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEEEE TPFYIYAWRFSAIMFLLWIAVIIIYVIKPLKTADVLSIILAVIFAASEYVYLYSIGAKVI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHH MLPLAYILYTIGKPLLFIDVGQLALIYALWRAFKNNLIKIKRGGK HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCEEEEECCCC >Mature Secondary Structure MKGELRYSLIIALILVVMTIAVSAATPVELLFSVESRLIAPNGNLIYVVYNDNSISWVTY CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCEEEEEECCCEEEEEEE TPFYIYAWRFSAIMFLLWIAVIIIYVIKPLKTADVLSIILAVIFAASEYVYLYSIGAKVI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHH MLPLAYILYTIGKPLLFIDVGQLALIYALWRAFKNNLIKIKRGGK HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA