| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041328
Identifier: 159041328
GI number: 159041328
Start: 784642
End: 785349
Strand: Reverse
Name: 159041328
Synonym: Cmaq_0754
Alternate gene names: NA
Gene position: 785349-784642 (Counterclockwise)
Preceding gene: 159041331
Following gene: 159041327
Centisome position: 37.8
GC content: 40.25
Gene sequence:
>708_bases ATGACATATAGTTACATTTATTTACCAGTTCAGAACAGTTTAATTATGGTTAGTGTCCAGCAGGCCGTTAGGGTAATTGT AGAGGAGAATCCCCTCTACTTAATTGCATTATCAAGCGGCATAGCCAATCTATCAGCCATAGCTAGGGAGGTTAAACCAC TTGTTGAATCCATAGTTGGTAAGGAGGTTAACCTAATGACCATAGTTAAGGCGTTAGAGAGGTTAACATCAAGGAAAACC CCAGCTTCAATAAGGGATATTGGGGAAGCCTTAGAGAAGGCTGAGGTAGTCATATTTAATGGTGTTGATGAAGTTGAATT AAGCCTAGCGGATACGGTTAAGCTTTATGAATCACATGAGTTAATGGAACTGTTTAAAGGCTACTCAATACTCTTAACTG ATGGGGAGAGAGTGAAATTAATTGCGCCGGTCGCTGTTCTAGGTAAGTTCACTAATCCAGTGGGTAGACTGGAGTATACA TTGGTTAGAATAATGTTTGGGGAAAAGGCACCTGTGGGTTTTGTAACATTCATGGTTCAGTTAGCTAGGGCAAGTGGAAT AACAATAAGGCACATGCTTAGGTACGATAATGATGTATTCATAGTTGTTGAGAGAAGTTACGCGGTGGCATTACTTAAGT TGATTGAGGACCTAAGGAACAGCGTTAAGAGGAGGCAGGTGAACCAAGGCAATGATACTAATAAATAA
Upstream 100 bases:
>100_bases TATTCCTGATATTACTGAGAGAGCGTATTGGAGAGGTGTTATGTATATCATAAACTTACGCTTAACCGGCTTCTAATTTA AAAACTATTTTGTCAAGAAT
Downstream 100 bases:
>100_bases CCCTCCTACCCTCATTAAGCAATGAGAATAAGAGACCTAAGAGGCATAAGCAGGGTGGTGCTGGCCCTGGACTTAACGGA ACCTAGGAGGTATTGGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTYSYIYLPVQNSLIMVSVQQAVRVIVEENPLYLIALSSGIANLSAIAREVKPLVESIVGKEVNLMTIVKALERLTSRKT PASIRDIGEALEKAEVVIFNGVDEVELSLADTVKLYESHELMELFKGYSILLTDGERVKLIAPVAVLGKFTNPVGRLEYT LVRIMFGEKAPVGFVTFMVQLARASGITIRHMLRYDNDVFIVVERSYAVALLKLIEDLRNSVKRRQVNQGNDTNK
Sequences:
>Translated_235_residues MTYSYIYLPVQNSLIMVSVQQAVRVIVEENPLYLIALSSGIANLSAIAREVKPLVESIVGKEVNLMTIVKALERLTSRKT PASIRDIGEALEKAEVVIFNGVDEVELSLADTVKLYESHELMELFKGYSILLTDGERVKLIAPVAVLGKFTNPVGRLEYT LVRIMFGEKAPVGFVTFMVQLARASGITIRHMLRYDNDVFIVVERSYAVALLKLIEDLRNSVKRRQVNQGNDTNK >Mature_234_residues TYSYIYLPVQNSLIMVSVQQAVRVIVEENPLYLIALSSGIANLSAIAREVKPLVESIVGKEVNLMTIVKALERLTSRKTP ASIRDIGEALEKAEVVIFNGVDEVELSLADTVKLYESHELMELFKGYSILLTDGERVKLIAPVAVLGKFTNPVGRLEYTL VRIMFGEKAPVGFVTFMVQLARASGITIRHMLRYDNDVFIVVERSYAVALLKLIEDLRNSVKRRQVNQGNDTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26287; Mature: 26156
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSYIYLPVQNSLIMVSVQQAVRVIVEENPLYLIALSSGIANLSAIAREVKPLVESIVG CCEEEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC KEVNLMTIVKALERLTSRKTPASIRDIGEALEKAEVVIFNGVDEVELSLADTVKLYESHE CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH LMELFKGYSILLTDGERVKLIAPVAVLGKFTNPVGRLEYTLVRIMFGEKAPVGFVTFMVQ HHHHHCCCEEEEECCCEEEEEEHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHH LARASGITIRHMLRYDNDVFIVVERSYAVALLKLIEDLRNSVKRRQVNQGNDTNK HHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TYSYIYLPVQNSLIMVSVQQAVRVIVEENPLYLIALSSGIANLSAIAREVKPLVESIVG CEEEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC KEVNLMTIVKALERLTSRKTPASIRDIGEALEKAEVVIFNGVDEVELSLADTVKLYESHE CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH LMELFKGYSILLTDGERVKLIAPVAVLGKFTNPVGRLEYTLVRIMFGEKAPVGFVTFMVQ HHHHHCCCEEEEECCCEEEEEEHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHH LARASGITIRHMLRYDNDVFIVVERSYAVALLKLIEDLRNSVKRRQVNQGNDTNK HHHCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA