Click here to switch to the map view.

The map label for this gene is 159041331

Identifier: 159041331

GI number: 159041331

Start: 787584

End: 788405

Strand: Reverse

Name: 159041331

Synonym: Cmaq_0757

Alternate gene names: NA

Gene position: 788405-787584 (Counterclockwise)

Preceding gene: 159041333

Following gene: 159041328

Centisome position: 37.95

GC content: 44.04

Gene sequence:

>822_bases
GTGATTGATGGTGAGTTAATGGGTGTGCCACGTAGGGTAATTAGCCTTAATCCATCTGTAACAGAGTTCCTATTCCTACT
TGGGGCTGGGGATAGGGTTGTGGGTGTTGATGTGTGGAGTTATAGGCCGCGTGAAGCCATGAGGGTTATGAGGATTGGTT
CATTTACGTCAGCTAACATTGATTTGATTAAGAACTTAAACCCAGACTTAATAATACTATCATATCCTGTTCAAAGGCAG
TTGGTTAACCAATTGAGGGCGCTGGCACCTGTATTGGCTATACCTACCCCAGTTAACTTAAACACTGCCCTAGGCTTCTT
TGAGATGATTGGTGGTTTACTTGATATGGATGAGGAGGCCTTGAGGCTGGTAGGTATTTACCGTGATTTAATGAGGCGTG
AGGCTAATGTTGACGGCGTTCTCGCAGTATTCTCACTGGGTGATTACGTGGTGCCGTGTGAAGCTTCTTACGTAGCCTCT
GCGCTTAATAGGGTTGGGTTGAATTACGTTAAGGGGTTTAAGTGCGTAATGGTTTTAACTAATAAGGATGGTTTAATCAA
CCTGATTAATCAACTTAACCCCAACCTAATAATATACGAGGGTAAGACTAAGACCTATAGACCCCAGGAACTTGACTTTG
CGGCTAATAGACGTGTATTATTCGTACCCAATGACACGTTAGCCCACTTTGGGCCAAGCCTACCACTGGATCTTAGGCTG
GTGAGTGAAGCCGTTAATAATGGTAGATCATTCGTGGAGGGCACATCCAGTGTTAATAGACCAAGCCTAAGTGATGAATG
GTATAAACCATACGTAACCTAG

Upstream 100 bases:

>100_bases
CCCCATGAGTTGAGGAATAATTATGAGTATTACTGGTGTTTAGGGATGAAGGGTTAAAATACAAGTCCCCTTACCTTAAT
GATGAAGTGGGTGGTGGAGG

Downstream 100 bases:

>100_bases
AGCAGCCTGGTTTGACTTCCACTGGTGGCTTGGTTAAGGTGCATTATTATTTAAATGCATTCTCCTAAAGCATTAAGCCA
ATCAACATCCTTCATAAGCC

Product: periplasmic binding protein

Products: NA

Alternate protein names: Ferric Ion ABC Transporter

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIDGELMGVPRRVISLNPSVTEFLFLLGAGDRVVGVDVWSYRPREAMRVMRIGSFTSANIDLIKNLNPDLIILSYPVQRQ
LVNQLRALAPVLAIPTPVNLNTALGFFEMIGGLLDMDEEALRLVGIYRDLMRREANVDGVLAVFSLGDYVVPCEASYVAS
ALNRVGLNYVKGFKCVMVLTNKDGLINLINQLNPNLIIYEGKTKTYRPQELDFAANRRVLFVPNDTLAHFGPSLPLDLRL
VSEAVNNGRSFVEGTSSVNRPSLSDEWYKPYVT

Sequences:

>Translated_273_residues
MIDGELMGVPRRVISLNPSVTEFLFLLGAGDRVVGVDVWSYRPREAMRVMRIGSFTSANIDLIKNLNPDLIILSYPVQRQ
LVNQLRALAPVLAIPTPVNLNTALGFFEMIGGLLDMDEEALRLVGIYRDLMRREANVDGVLAVFSLGDYVVPCEASYVAS
ALNRVGLNYVKGFKCVMVLTNKDGLINLINQLNPNLIIYEGKTKTYRPQELDFAANRRVLFVPNDTLAHFGPSLPLDLRL
VSEAVNNGRSFVEGTSSVNRPSLSDEWYKPYVT
>Mature_273_residues
MIDGELMGVPRRVISLNPSVTEFLFLLGAGDRVVGVDVWSYRPREAMRVMRIGSFTSANIDLIKNLNPDLIILSYPVQRQ
LVNQLRALAPVLAIPTPVNLNTALGFFEMIGGLLDMDEEALRLVGIYRDLMRREANVDGVLAVFSLGDYVVPCEASYVAS
ALNRVGLNYVKGFKCVMVLTNKDGLINLINQLNPNLIIYEGKTKTYRPQELDFAANRRVLFVPNDTLAHFGPSLPLDLRL
VSEAVNNGRSFVEGTSSVNRPSLSDEWYKPYVT

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30379; Mature: 30379

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGELMGVPRRVISLNPSVTEFLFLLGAGDRVVGVDVWSYRPREAMRVMRIGSFTSANI
CCCCCCCCCCHHEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCH
DLIKNLNPDLIILSYPVQRQLVNQLRALAPVLAIPTPVNLNTALGFFEMIGGLLDMDEEA
HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHH
LRLVGIYRDLMRREANVDGVLAVFSLGDYVVPCEASYVASALNRVGLNYVKGFKCVMVLT
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCHHHHHHHHHHHCHHHHCCEEEEEEEE
NKDGLINLINQLNPNLIIYEGKTKTYRPQELDFAANRRVLFVPNDTLAHFGPSLPLDLRL
CCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCHHHHH
VSEAVNNGRSFVEGTSSVNRPSLSDEWYKPYVT
HHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDGELMGVPRRVISLNPSVTEFLFLLGAGDRVVGVDVWSYRPREAMRVMRIGSFTSANI
CCCCCCCCCCHHEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCH
DLIKNLNPDLIILSYPVQRQLVNQLRALAPVLAIPTPVNLNTALGFFEMIGGLLDMDEEA
HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHH
LRLVGIYRDLMRREANVDGVLAVFSLGDYVVPCEASYVASALNRVGLNYVKGFKCVMVLT
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCHHHHHHHHHHHCHHHHCCEEEEEEEE
NKDGLINLINQLNPNLIIYEGKTKTYRPQELDFAANRRVLFVPNDTLAHFGPSLPLDLRL
CCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCHHHHH
VSEAVNNGRSFVEGTSSVNRPSLSDEWYKPYVT
HHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA