| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is mmlH [H]
Identifier: 159041315
GI number: 159041315
Start: 773301
End: 774077
Strand: Reverse
Name: mmlH [H]
Synonym: Cmaq_0741
Alternate gene names: 159041315
Gene position: 774077-773301 (Counterclockwise)
Preceding gene: 159041318
Following gene: 159041314
Centisome position: 37.26
GC content: 42.86
Gene sequence:
>777_bases TTGGGATTACACTACGTTATTCCAAGTTCATCCTTCACGGAGCTTGGGTGGAGGTGGATGTTCTGGATAGGCATAATTCC TGCGTTAATAGACTTAATTGTGAGACTTTCAATGCCTGAGTCAGCAATGTGGGAGGGGGTTAGTAAGGAGAGGGGTATTA ATAAGGCACCCTTCACTACAATACTCAGGAACCCAGCCTATAGACTTGGTGCCTTAACCGATGTATTAGCCATGACGGGT ATAGCTTGGGTTTATGGGTTAACACTCGGCTTCTACCCGACGGTGTTATCGTACCATAATTTCACTAAGTTCCCATACTT CCTCTACGTAGTAATATTAGTATCACTACTAGGTTACTTAACCTCAGGCTTCACTAGTGATGTAATTGGGAGGAGGGTAA CAATGGTGGTGTTCTCAGCTACTGCAATAGCCTTAGCCATACCATTAACGTACCTGATACTTAAGCATGCGTACGGCTTC TACGGTACAATGACCTTAGCTAGCCTACTTGCCTTCTTAACCACGGGAATATATGGTGTTATACCCGCTTACCTATCTGA GAAGTTTCAAACAGATGTGAGGAGTACTGGAGTTGGTTTCTCATTTAATGGAGGCTTCATTTTAGGTAACTGGAGTACGG TGTTCCTGCTGCTGGTTTCAGCAATAAGTAATCCAAGCTTCTACGTATACTGGGGTTTGTTTATAATAATTGGTGAAGTC ATGATACTTGCATCAGCATTACTATCAAGTGAAACCAAGGGTATTGAACTACAGTGA
Upstream 100 bases:
>100_bases TAGGTTCATTTCTCGTTGAGTCAGTTAATAGGGGGAGGTATGTGGAGCTTCGCTTCAAAGCGGTTACCCAATAGGATATA CCATTGCTGCCTTAGTTTAC
Downstream 100 bases:
>100_bases TTACTACATTTAAAAACTCACTTGATTTAAAGTAAACATGGATGAGGAGGTTAATAGGGCTATTCAGTTGGCTGAATCAT ACTTAAGTAACTCATACTCA
Product: proline/betaine transport protein-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MGLHYVIPSSSFTELGWRWMFWIGIIPALIDLIVRLSMPESAMWEGVSKERGINKAPFTTILRNPAYRLGALTDVLAMTG IAWVYGLTLGFYPTVLSYHNFTKFPYFLYVVILVSLLGYLTSGFTSDVIGRRVTMVVFSATAIALAIPLTYLILKHAYGF YGTMTLASLLAFLTTGIYGVIPAYLSEKFQTDVRSTGVGFSFNGGFILGNWSTVFLLLVSAISNPSFYVYWGLFIIIGEV MILASALLSSETKGIELQ
Sequences:
>Translated_258_residues MGLHYVIPSSSFTELGWRWMFWIGIIPALIDLIVRLSMPESAMWEGVSKERGINKAPFTTILRNPAYRLGALTDVLAMTG IAWVYGLTLGFYPTVLSYHNFTKFPYFLYVVILVSLLGYLTSGFTSDVIGRRVTMVVFSATAIALAIPLTYLILKHAYGF YGTMTLASLLAFLTTGIYGVIPAYLSEKFQTDVRSTGVGFSFNGGFILGNWSTVFLLLVSAISNPSFYVYWGLFIIIGEV MILASALLSSETKGIELQ >Mature_257_residues GLHYVIPSSSFTELGWRWMFWIGIIPALIDLIVRLSMPESAMWEGVSKERGINKAPFTTILRNPAYRLGALTDVLAMTGI AWVYGLTLGFYPTVLSYHNFTKFPYFLYVVILVSLLGYLTSGFTSDVIGRRVTMVVFSATAIALAIPLTYLILKHAYGFY GTMTLASLLAFLTTGIYGVIPAYLSEKFQTDVRSTGVGFSFNGGFILGNWSTVFLLLVSAISNPSFYVYWGLFIIIGEVM ILASALLSSETKGIELQ
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=248, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 28537; Mature: 28406
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLHYVIPSSSFTELGWRWMFWIGIIPALIDLIVRLSMPESAMWEGVSKERGINKAPFTT CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCHHH ILRNPAYRLGALTDVLAMTGIAWVYGLTLGFYPTVLSYHNFTKFPYFLYVVILVSLLGYL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TSGFTSDVIGRRVTMVVFSATAIALAIPLTYLILKHAYGFYGTMTLASLLAFLTTGIYGV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPAYLSEKFQTDVRSTGVGFSFNGGFILGNWSTVFLLLVSAISNPSFYVYWGLFIIIGEV HHHHHHHHHHHHHHHCCCCEEECCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MILASALLSSETKGIELQ HHHHHHHHHCCCCCCCCC >Mature Secondary Structure GLHYVIPSSSFTELGWRWMFWIGIIPALIDLIVRLSMPESAMWEGVSKERGINKAPFTT CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCCCCHHH ILRNPAYRLGALTDVLAMTGIAWVYGLTLGFYPTVLSYHNFTKFPYFLYVVILVSLLGYL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TSGFTSDVIGRRVTMVVFSATAIALAIPLTYLILKHAYGFYGTMTLASLLAFLTTGIYGV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPAYLSEKFQTDVRSTGVGFSFNGGFILGNWSTVFLLLVSAISNPSFYVYWGLFIIIGEV HHHHHHHHHHHHHHHCCCCEEECCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH MILASALLSSETKGIELQ HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]