| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041274
Identifier: 159041274
GI number: 159041274
Start: 734397
End: 736331
Strand: Reverse
Name: 159041274
Synonym: Cmaq_0700
Alternate gene names: NA
Gene position: 736331-734397 (Counterclockwise)
Preceding gene: 159041275
Following gene: 159041267
Centisome position: 35.44
GC content: 42.07
Gene sequence:
>1935_bases ATGGTTTCACTTTCAAGGGCAGCTTTATTTAATAAGGTTTACGGTGGTTTACTAGGTAAGAATGCTGGTGGTAGTCTTGG TACCCCTTATGAGAGGGGTTTTGGCCAGGAGGATTTAATTGATGTTAGACTTGAGCCTAAGCTTTACCCTAATGATGATT TTGAGGTTCAGATGGCTTGGCTTAGGCTTATTGAGGATAGGGGACTTGATGTGACTGAGCATGATCTTGCCCAGTGTTGG CTCGACTGTATTCACTATAATTGGGATGAATATGGGTTGAGTAAGAGGAATCTGAGGCTGGGCATACTACCACCCATGTC AGGTTTCTTCAATAATTGGTTTAAACACTGCATGGGTTCACCCATTAGGTCTGAGGTTTGGGCAATGATAGCTCCAGGGT TACCTGACGTAGCTGCTGAGTACGCTTTTAAGGATGCTATTGTTGACCATGGTGGTGGTGAGTCTGTTTACGGTGAAGTA TTTAATGCGGTATTAGAGTCTTTAGCATTCATTGAAGGTGACTTAATTAAGTTAATTAAGCATGCGTTAAGCTACATACC CCAGAATAGCTTAACTCATAAGGCAATTGAGAATGCCCTTAATGCCTACGCTAAGGGCTTAGATTTAAGGGAGGCTAGGA GAATTATTATTGAGCTCGCACCTACTGAGTACCGTAAAATAGCCCAATACTCACCCATTAACCTAGGCTTTGAGGTATTA GGTCTACTCTACGGTAACAGCTTCATGGATGCTATTGCTAAGACTATTAGCCTAGGCTACGACACTGACAGCACCGCGGC CACCGTGGGTGCTGTATTGGGTATTATTCATGGCGCGGATTACATACCCCAAGACTACGTTAAGGTTTACGAAGAGATTA TGACCAATGAGACATGGGGTGGTGTATCTAATATTAGGTCTAATAGGACTGTGACCGAGTTAGCTAATAGGATCCTTAAG GTTACGTATAGATTACTTGCTAGGTATAATGATAGAGTTAAGATTAACCATGAAGGTGGTGTTGAATGGTTAATAGACCC ATTCACGGTTAAGCCTAATGAATCATGGTTGAATTATAAGCCAAATACCTGGAGGCTTAGATTCATTGGGATTGAGGCCA CCGTTGAGCACCCAATCGGCCCGGTGCTTAAGCCTAATGTTGAATTACCCATAATAATCACAATTAGGAGCATTAGGTTA AGTCCAATTAACCTAAACTACATTATACACGGCATCAACACTAAGGCCTATCAAATAAACCCAGTGAGTGGAGGGTTATT CATTGAGCCTAATTCCACGGCCGAGGTTGAGTTTAGGGTTAGGTTAATTAACCTTAATGAGCTTAATACCGTTGAGCACC CTATCATTCAATTCACTGCTTTAGACTCATTTGAGTCAATTAACATAACCTTAACAATATTACCACCGGTGGTTTGGTTC ATTAATAAGGTTAATGACAGTGATGAGGATGTTGATAGGTGGGTTGGTGAAGCTGCGGCTGGTGAATGGGCTGCGGTTTA CAGGGATGGTTATGACCTCAGCCTCGAGGATTTAATACCTAAGGGTGCTTCAATGGTTGCTGTGGGTTTCATTTATAATC CAGGTGATTCAAGAATAATGCACTTGGGTATCCCCAATAATGCACCATACGCTAAACTGTGGTTTAATGAGGAGCCCATT GTTGAATCCAAGGAGAAGTATATGCTTAGGCCTAATTACGATGGTGATGGTAGGAATTACGCAGATGCCTTAATGAGACA TGGGTGGAATACTGTTTCCATAAAGGTTAAGCGCATTGATGAACCAGTAAGCCTACACTTCATGATTAGTGAATCCTCCA AGAACCTGCATAGAGGAGTAACAAACATAATACAGTATAAAAGACCCAGTTTAAAAACAGACTACGACTCCGATGAGGAC CTTAAACCCTCCTGA
Upstream 100 bases:
>100_bases ATAAGCTATTGATTCGTGTATTAATTCAAGGATTTATTGAATCTGGGTAGGAAATTAATGCGTTATCTAAAGCTTTAAAA CCAATGCGACTTAATTACCT
Downstream 100 bases:
>100_bases CCAGCCTGTTTTCTAATATCATTGATAGTCCATACCAGCAGTATTATGAGGAATACCAGTGCCACTAAGGCTACGTAGAA GCTTACCTCATCTGGGTTCA
Product: ADP-ribosylation/crystallin J1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MVSLSRAALFNKVYGGLLGKNAGGSLGTPYERGFGQEDLIDVRLEPKLYPNDDFEVQMAWLRLIEDRGLDVTEHDLAQCW LDCIHYNWDEYGLSKRNLRLGILPPMSGFFNNWFKHCMGSPIRSEVWAMIAPGLPDVAAEYAFKDAIVDHGGGESVYGEV FNAVLESLAFIEGDLIKLIKHALSYIPQNSLTHKAIENALNAYAKGLDLREARRIIIELAPTEYRKIAQYSPINLGFEVL GLLYGNSFMDAIAKTISLGYDTDSTAATVGAVLGIIHGADYIPQDYVKVYEEIMTNETWGGVSNIRSNRTVTELANRILK VTYRLLARYNDRVKINHEGGVEWLIDPFTVKPNESWLNYKPNTWRLRFIGIEATVEHPIGPVLKPNVELPIIITIRSIRL SPINLNYIIHGINTKAYQINPVSGGLFIEPNSTAEVEFRVRLINLNELNTVEHPIIQFTALDSFESINITLTILPPVVWF INKVNDSDEDVDRWVGEAAAGEWAAVYRDGYDLSLEDLIPKGASMVAVGFIYNPGDSRIMHLGIPNNAPYAKLWFNEEPI VESKEKYMLRPNYDGDGRNYADALMRHGWNTVSIKVKRIDEPVSLHFMISESSKNLHRGVTNIIQYKRPSLKTDYDSDED LKPS
Sequences:
>Translated_644_residues MVSLSRAALFNKVYGGLLGKNAGGSLGTPYERGFGQEDLIDVRLEPKLYPNDDFEVQMAWLRLIEDRGLDVTEHDLAQCW LDCIHYNWDEYGLSKRNLRLGILPPMSGFFNNWFKHCMGSPIRSEVWAMIAPGLPDVAAEYAFKDAIVDHGGGESVYGEV FNAVLESLAFIEGDLIKLIKHALSYIPQNSLTHKAIENALNAYAKGLDLREARRIIIELAPTEYRKIAQYSPINLGFEVL GLLYGNSFMDAIAKTISLGYDTDSTAATVGAVLGIIHGADYIPQDYVKVYEEIMTNETWGGVSNIRSNRTVTELANRILK VTYRLLARYNDRVKINHEGGVEWLIDPFTVKPNESWLNYKPNTWRLRFIGIEATVEHPIGPVLKPNVELPIIITIRSIRL SPINLNYIIHGINTKAYQINPVSGGLFIEPNSTAEVEFRVRLINLNELNTVEHPIIQFTALDSFESINITLTILPPVVWF INKVNDSDEDVDRWVGEAAAGEWAAVYRDGYDLSLEDLIPKGASMVAVGFIYNPGDSRIMHLGIPNNAPYAKLWFNEEPI VESKEKYMLRPNYDGDGRNYADALMRHGWNTVSIKVKRIDEPVSLHFMISESSKNLHRGVTNIIQYKRPSLKTDYDSDED LKPS >Mature_644_residues MVSLSRAALFNKVYGGLLGKNAGGSLGTPYERGFGQEDLIDVRLEPKLYPNDDFEVQMAWLRLIEDRGLDVTEHDLAQCW LDCIHYNWDEYGLSKRNLRLGILPPMSGFFNNWFKHCMGSPIRSEVWAMIAPGLPDVAAEYAFKDAIVDHGGGESVYGEV FNAVLESLAFIEGDLIKLIKHALSYIPQNSLTHKAIENALNAYAKGLDLREARRIIIELAPTEYRKIAQYSPINLGFEVL GLLYGNSFMDAIAKTISLGYDTDSTAATVGAVLGIIHGADYIPQDYVKVYEEIMTNETWGGVSNIRSNRTVTELANRILK VTYRLLARYNDRVKINHEGGVEWLIDPFTVKPNESWLNYKPNTWRLRFIGIEATVEHPIGPVLKPNVELPIIITIRSIRL SPINLNYIIHGINTKAYQINPVSGGLFIEPNSTAEVEFRVRLINLNELNTVEHPIIQFTALDSFESINITLTILPPVVWF INKVNDSDEDVDRWVGEAAAGEWAAVYRDGYDLSLEDLIPKGASMVAVGFIYNPGDSRIMHLGIPNNAPYAKLWFNEEPI VESKEKYMLRPNYDGDGRNYADALMRHGWNTVSIKVKRIDEPVSLHFMISESSKNLHRGVTNIIQYKRPSLKTDYDSDED LKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72613; Mature: 72613
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLSRAALFNKVYGGLLGKNAGGSLGTPYERGFGQEDLIDVRLEPKLYPNDDFEVQMAW CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECCEECCCCCCHHHHHH LRLIEDRGLDVTEHDLAQCWLDCIHYNWDEYGLSKRNLRLGILPPMSGFFNNWFKHCMGS HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCC PIRSEVWAMIAPGLPDVAAEYAFKDAIVDHGGGESVYGEVFNAVLESLAFIEGDLIKLIK CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HALSYIPQNSLTHKAIENALNAYAKGLDLREARRIIIELAPTEYRKIAQYSPINLGFEVL HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCHHHHHHHCCCCCCCCHHHH GLLYGNSFMDAIAKTISLGYDTDSTAATVGAVLGIIHGADYIPQDYVKVYEEIMTNETWG HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC GVSNIRSNRTVTELANRILKVTYRLLARYNDRVKINHEGGVEWLIDPFTVKPNESWLNYK CHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEECCCCCCCCCC PNTWRLRFIGIEATVEHPIGPVLKPNVELPIIITIRSIRLSPINLNYIIHGINTKAYQIN CCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECEEEEEEEEEECCCCEEEEE PVSGGLFIEPNSTAEVEFRVRLINLNELNTVEHPIIQFTALDSFESINITLTILPPVVWF ECCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHH INKVNDSDEDVDRWVGEAAAGEWAAVYRDGYDLSLEDLIPKGASMVAVGFIYNPGDSRIM HHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCEEE HLGIPNNAPYAKLWFNEEPIVESKEKYMLRPNYDGDGRNYADALMRHGWNTVSIKVKRID EEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECC EPVSLHFMISESSKNLHRGVTNIIQYKRPSLKTDYDSDEDLKPS CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVSLSRAALFNKVYGGLLGKNAGGSLGTPYERGFGQEDLIDVRLEPKLYPNDDFEVQMAW CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECCEECCCCCCHHHHHH LRLIEDRGLDVTEHDLAQCWLDCIHYNWDEYGLSKRNLRLGILPPMSGFFNNWFKHCMGS HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCC PIRSEVWAMIAPGLPDVAAEYAFKDAIVDHGGGESVYGEVFNAVLESLAFIEGDLIKLIK CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HALSYIPQNSLTHKAIENALNAYAKGLDLREARRIIIELAPTEYRKIAQYSPINLGFEVL HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCEEEEEECCHHHHHHHCCCCCCCCHHHH GLLYGNSFMDAIAKTISLGYDTDSTAATVGAVLGIIHGADYIPQDYVKVYEEIMTNETWG HHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC GVSNIRSNRTVTELANRILKVTYRLLARYNDRVKINHEGGVEWLIDPFTVKPNESWLNYK CHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEECCCCCCCCCC PNTWRLRFIGIEATVEHPIGPVLKPNVELPIIITIRSIRLSPINLNYIIHGINTKAYQIN CCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECEEEEEEEEEECCCCEEEEE PVSGGLFIEPNSTAEVEFRVRLINLNELNTVEHPIIQFTALDSFESINITLTILPPVVWF ECCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHH INKVNDSDEDVDRWVGEAAAGEWAAVYRDGYDLSLEDLIPKGASMVAVGFIYNPGDSRIM HHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEEEEEECCCCCEEE HLGIPNNAPYAKLWFNEEPIVESKEKYMLRPNYDGDGRNYADALMRHGWNTVSIKVKRID EEECCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECC EPVSLHFMISESSKNLHRGVTNIIQYKRPSLKTDYDSDEDLKPS CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA