| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041267
Identifier: 159041267
GI number: 159041267
Start: 726836
End: 727684
Strand: Reverse
Name: 159041267
Synonym: Cmaq_0689
Alternate gene names: NA
Gene position: 727684-726836 (Counterclockwise)
Preceding gene: 159041274
Following gene: 159041266
Centisome position: 35.03
GC content: 41.11
Gene sequence:
>849_bases ATGAAGAGTGCTAGGAGACTGAATCCGGTAGTGAAGAAGGTTCCGGTTGACCCAATTAAGTACTATGACTCAGTGGGTGA ATTAATGCTTGACTTCATGGTTAATAGGACCACCCAAGTCATAGTTCAGCAATCCAGTGGTGTTAGGTTGATTAGGAGTA TTGAGGGTAAGCCAATAGTGATAAATAGTATTAATGATTTAAAATCCTTTGTTGCTCAAGGTGGGTTAGACTTCATGGCT TCAGTTAAGCCAATAGGTTCAAGTAACGTTGATGTCCTAGTTGCTGATATTAAGGTTAAGCAGGTAATGTTTAATACACC TGAGGGTTACTTAATCATGCACATAGCCTCCAACGCCGTTAGGCTGGGTTTTGAGGCCGTGGGTATTGGTAACGTGTTAA TGTACTTTGACGGCATGAATGGCTTTAAGGTCTTCGCTAGGCTTAATGAAAAGAATGGTGTTGATTTGAAGAATGCCTCT AAGTTACTTAGAATCATAATTGACGCCGCCGAGAGGGCTATGAAGAGGTTCAGTAGGTTCAGTGGGTTAATGAGTAACGT AACCCTGGGCGTTAACACACTGAGTAAGGTTAAGGCCTTTAGGGTACCCTTATCGATACATTGGTCAACTAAATTATCAG CAATACCCATACCACACTTCTGTGTTAAGAACTTCTCCTTAATGGATGCTGAGCCTGTTAAAACATTGAGTAACCCTAGC GCATACTCATTCATGAGGAATCTTAAACCCAATTCAGTGAATTTAACTCAACTACTGGCTGATGAGGATTACGTATTAAC GTACAGGATTAAGGCGCATATACTTAGCGGTATTAGGCTTGAATGCTGA
Upstream 100 bases:
>100_bases CGCCAATACTGCTTAGCCTCAATTTAAGCTTACCATAATCGTTAAATGACCCTAAGCAACAGTAAGTTAATATACTATTG TTCAACACCAGTTAGTGAGT
Downstream 100 bases:
>100_bases ATGTGGGTTATGTTTAATAACTCCTAACTGTAATTAAACTTCATGAAGATTAGGGCAGTGACCTTATTCACAGATGACTT AGCCTCATTACCTAACCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKSARRLNPVVKKVPVDPIKYYDSVGELMLDFMVNRTTQVIVQQSSGVRLIRSIEGKPIVINSINDLKSFVAQGGLDFMA SVKPIGSSNVDVLVADIKVKQVMFNTPEGYLIMHIASNAVRLGFEAVGIGNVLMYFDGMNGFKVFARLNEKNGVDLKNAS KLLRIIIDAAERAMKRFSRFSGLMSNVTLGVNTLSKVKAFRVPLSIHWSTKLSAIPIPHFCVKNFSLMDAEPVKTLSNPS AYSFMRNLKPNSVNLTQLLADEDYVLTYRIKAHILSGIRLEC
Sequences:
>Translated_282_residues MKSARRLNPVVKKVPVDPIKYYDSVGELMLDFMVNRTTQVIVQQSSGVRLIRSIEGKPIVINSINDLKSFVAQGGLDFMA SVKPIGSSNVDVLVADIKVKQVMFNTPEGYLIMHIASNAVRLGFEAVGIGNVLMYFDGMNGFKVFARLNEKNGVDLKNAS KLLRIIIDAAERAMKRFSRFSGLMSNVTLGVNTLSKVKAFRVPLSIHWSTKLSAIPIPHFCVKNFSLMDAEPVKTLSNPS AYSFMRNLKPNSVNLTQLLADEDYVLTYRIKAHILSGIRLEC >Mature_282_residues MKSARRLNPVVKKVPVDPIKYYDSVGELMLDFMVNRTTQVIVQQSSGVRLIRSIEGKPIVINSINDLKSFVAQGGLDFMA SVKPIGSSNVDVLVADIKVKQVMFNTPEGYLIMHIASNAVRLGFEAVGIGNVLMYFDGMNGFKVFARLNEKNGVDLKNAS KLLRIIIDAAERAMKRFSRFSGLMSNVTLGVNTLSKVKAFRVPLSIHWSTKLSAIPIPHFCVKNFSLMDAEPVKTLSNPS AYSFMRNLKPNSVNLTQLLADEDYVLTYRIKAHILSGIRLEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31329; Mature: 31329
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSARRLNPVVKKVPVDPIKYYDSVGELMLDFMVNRTTQVIVQQSSGVRLIRSIEGKPIV CCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEE INSINDLKSFVAQGGLDFMASVKPIGSSNVDVLVADIKVKQVMFNTPEGYLIMHIASNAV EECHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCHH RLGFEAVGIGNVLMYFDGMNGFKVFARLNEKNGVDLKNASKLLRIIIDAAERAMKRFSRF HHCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGLMSNVTLGVNTLSKVKAFRVPLSIHWSTKLSAIPIPHFCVKNFSLMDAEPVKTLSNPS HHHHHHHEECHHHHHHHHHEECCEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCH AYSFMRNLKPNSVNLTQLLADEDYVLTYRIKAHILSGIRLEC HHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEHHHCCCEECC >Mature Secondary Structure MKSARRLNPVVKKVPVDPIKYYDSVGELMLDFMVNRTTQVIVQQSSGVRLIRSIEGKPIV CCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEE INSINDLKSFVAQGGLDFMASVKPIGSSNVDVLVADIKVKQVMFNTPEGYLIMHIASNAV EECHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCHH RLGFEAVGIGNVLMYFDGMNGFKVFARLNEKNGVDLKNASKLLRIIIDAAERAMKRFSRF HHCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGLMSNVTLGVNTLSKVKAFRVPLSIHWSTKLSAIPIPHFCVKNFSLMDAEPVKTLSNPS HHHHHHHEECHHHHHHHHHEECCEEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCH AYSFMRNLKPNSVNLTQLLADEDYVLTYRIKAHILSGIRLEC HHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEEHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA