Click here to switch to the map view.

The map label for this gene is aroD [H]

Identifier: 159041252

GI number: 159041252

Start: 711454

End: 712164

Strand: Reverse

Name: aroD [H]

Synonym: Cmaq_0674

Alternate gene names: 159041252

Gene position: 712164-711454 (Counterclockwise)

Preceding gene: 159041254

Following gene: 159041249

Centisome position: 34.28

GC content: 43.74

Gene sequence:

>711_bases
ATGCCTCATAAAACTGCCTTAAGCGCCAATAGACCAATGCTTGTGTGTGCAGTACCCGTTAAGAGTATTGAGGAATTGAA
CCCACCCAGTGGATGCGAGGCCGTTGAGTTAAGGCTTGATTACATGGGTAATGAAATTGAGGCTAGGTTGAGTGAATTAA
GTAGCTTAATTAAGAAATTACTAAGTAGGGTTAAGGTAATAGTAACGGTTAGGGATCATGAGGAGGGGGGTGTTAATCAG
GTTGATTCATCATTGAAACTTAAGATCATTAACCTTGCCCATGAAAACGGTGCACTAGTGGATATTGAGGTTGAATTCGC
CAGGAGGTACGCCAGGTACATTGCATCATGGGGTGATGTGATATTATCTAGGCATATTTTTAATAAACGCCCTGACATTA
GGGGAATAATCACTAGTGACTACGAGTTAGCCAACTCCATGAATGCCTTCACCTACAAGGTAGCCACAATTAATGGGGAT
GATTTACCAGCATTAGTGGAGTTACTGGTTAAGGAAAGGGAAGTACCTGTGGCCATAGTGCCCATGCAGCCTATACAGAG
GGCTGCTGCGATAATGCTTGGCACAGCCTTAATGTACTGCTCCACGGGTGATGGGACTGCGCCTGGTCAATTAAGCATAC
AGGAATGCGTTAGAATTAAGGAGGAGAGGATTAGGCTATTAGAGGCTCCTAAACGTAATCACTCCTATTAA

Upstream 100 bases:

>100_bases
AGTAATGCAGCATCCTTAACCTTCCCATCACTAACAATGAATATTACACCACGCATAGCTTGAGTTAAGCATAAAACTAC
TGAAATACATTACTCCCCCA

Downstream 100 bases:

>100_bases
CCTCATTTAACGCATGCTCACCCTTAAGGTACCTGGTGAGGTTAGTGACAGCCATAATTACGGCATTCCTAGCGACATCA
GGTTGAGCACCACCAGCAAT

Product: 3-dehydroquinate dehydratase

Products: NA

Alternate protein names: 3-dehydroquinase; Type I DHQase [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPHKTALSANRPMLVCAVPVKSIEELNPPSGCEAVELRLDYMGNEIEARLSELSSLIKKLLSRVKVIVTVRDHEEGGVNQ
VDSSLKLKIINLAHENGALVDIEVEFARRYARYIASWGDVILSRHIFNKRPDIRGIITSDYELANSMNAFTYKVATINGD
DLPALVELLVKEREVPVAIVPMQPIQRAAAIMLGTALMYCSTGDGTAPGQLSIQECVRIKEERIRLLEAPKRNHSY

Sequences:

>Translated_236_residues
MPHKTALSANRPMLVCAVPVKSIEELNPPSGCEAVELRLDYMGNEIEARLSELSSLIKKLLSRVKVIVTVRDHEEGGVNQ
VDSSLKLKIINLAHENGALVDIEVEFARRYARYIASWGDVILSRHIFNKRPDIRGIITSDYELANSMNAFTYKVATINGD
DLPALVELLVKEREVPVAIVPMQPIQRAAAIMLGTALMYCSTGDGTAPGQLSIQECVRIKEERIRLLEAPKRNHSY
>Mature_235_residues
PHKTALSANRPMLVCAVPVKSIEELNPPSGCEAVELRLDYMGNEIEARLSELSSLIKKLLSRVKVIVTVRDHEEGGVNQV
DSSLKLKIINLAHENGALVDIEVEFARRYARYIASWGDVILSRHIFNKRPDIRGIITSDYELANSMNAFTYKVATINGDD
LPALVELLVKEREVPVAIVPMQPIQRAAAIMLGTALMYCSTGDGTAPGQLSIQECVRIKEERIRLLEAPKRNHSY

Specific function: Unknown

COG id: COG0710

COG function: function code E; 3-dehydroquinate dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I 3-dehydroquinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001381 [H]

Pfam domain/function: PF01487 DHquinase_I [H]

EC number: =4.2.1.10 [H]

Molecular weight: Translated: 26247; Mature: 26116

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKTALSANRPMLVCAVPVKSIEELNPPSGCEAVELRLDYMGNEIEARLSELSSLIKKL
CCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHH
LSRVKVIVTVRDHEEGGVNQVDSSLKLKIINLAHENGALVDIEVEFARRYARYIASWGDV
HHHHEEEEEEECCCCCCHHHCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
ILSRHIFNKRPDIRGIITSDYELANSMNAFTYKVATINGDDLPALVELLVKEREVPVAIV
HHHHHHHCCCCCCCEEEECCHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEE
PMQPIQRAAAIMLGTALMYCSTGDGTAPGQLSIQECVRIKEERIRLLEAPKRNHSY
CCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PHKTALSANRPMLVCAVPVKSIEELNPPSGCEAVELRLDYMGNEIEARLSELSSLIKKL
CCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHH
LSRVKVIVTVRDHEEGGVNQVDSSLKLKIINLAHENGALVDIEVEFARRYARYIASWGDV
HHHHEEEEEEECCCCCCHHHCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
ILSRHIFNKRPDIRGIITSDYELANSMNAFTYKVATINGDDLPALVELLVKEREVPVAIV
HHHHHHHCCCCCCCEEEECCHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEE
PMQPIQRAAAIMLGTALMYCSTGDGTAPGQLSIQECVRIKEERIRLLEAPKRNHSY
CCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]