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The map label for this gene is 159041180

Identifier: 159041180

GI number: 159041180

Start: 631772

End: 632773

Strand: Reverse

Name: 159041180

Synonym: Cmaq_0601

Alternate gene names: NA

Gene position: 632773-631772 (Counterclockwise)

Preceding gene: 159041182

Following gene: 159041179

Centisome position: 30.46

GC content: 40.92

Gene sequence:

>1002_bases
ATGATGGGGTTAACCAATAGGGAGGCTGAGGTCTTCCTAACAATAGCCGAGAAGGGTGAGGCAAGTGTTAAGGATATACT
GGAGTCAGTGGATGTTCACCAGCCTCAATTATATAATATATTATCAAGCCTACTTAGGAGGGGGTTCATAAAGGTTTCAA
GCAGTAGGCCTAAGAAGTACAGTGCCTATAACCTCTCCACAATAATAGATACCTATATTTCATCGTTCTCATCAATTAAG
GAGGTTGTTAAAAGAATAGAATCGCCAATACGCAGTAGTTCCCAAATATATGTTTCATATGGGATAGATGGCTTAAATAA
CGGCCTAGTGGAGGTTATTTCAAATGCACAGGTGGAGTTATATGGTGAGATACCTAGTTGGATTCTTAGGAAGAACCTAA
GGCTATTCATGGATGCATTAGGAAGAGGAGTTAGACTATATCTACTGGTTTACCCAAGTATTAGCGAAGAGGATCTTCAT
CCACTGAGGGAGTATGAGGATGCCGCGTGGATTAAGGTGAATAAGCTTGGGGACTTCCTTCTACTTGCCGCAGACCTTAG
TAAGGGTGTTTACGCAAGCAGGAGATCACTAACAGTTAATGAGGGGTCTCATTGCTACATAATTCAGGATAAAGACATAA
TAACTAGATTCCTCACAATATTCAATTCAACGTGGAAGGAATCAGAGGATGCGCTATACGTAGACCCAAGTAGGGGCAAG
TACCCGCGTAAATTCCTTAACATACACTTTGCCTTACTGACCCTTGAAGCATTATTAACACATGGCTATAACCCTGTTGT
ATCGGTTAAAGGCATACTCCTGAAGAATAATGAACCAATAGAGGTTAGGGGGGTTGTATCATCAGTTAACATGCTTAATA
GAGTATCTAACATTGTGGTAAGGAGTAATGGCAATCAATACACTATTGGAGGATATGACGCTGAGTTAGAGGATATCGAG
GCACAGGAAGTAGTAATAGAAAGCATAAGCCCCAATGCATAA

Upstream 100 bases:

>100_bases
AGGACTTTAAATACTTAACATTAACCTTATAAATAAAGTTGATGAGTACAATTAGTGGGGTATGACTATAGATAGAGATT
ACTTATTAAGGGTATTAACT

Downstream 100 bases:

>100_bases
GGGGAATTACCATAATGGTGGGTAAGAGCTAGTGAATACTAGTTTCATACTACACTTTTATAGTAATTTCGGAAAACTTT
AAATACTAGTTCTCAGTTTC

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: Transcriptional Regulator; Transcription Regulator; HTH Domain-Containing Protein; Sugar-Specific Transcriptional Regulator TrmB; Transcription Regulator TrmB-Like Protein

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MMGLTNREAEVFLTIAEKGEASVKDILESVDVHQPQLYNILSSLLRRGFIKVSSSRPKKYSAYNLSTIIDTYISSFSSIK
EVVKRIESPIRSSSQIYVSYGIDGLNNGLVEVISNAQVELYGEIPSWILRKNLRLFMDALGRGVRLYLLVYPSISEEDLH
PLREYEDAAWIKVNKLGDFLLLAADLSKGVYASRRSLTVNEGSHCYIIQDKDIITRFLTIFNSTWKESEDALYVDPSRGK
YPRKFLNIHFALLTLEALLTHGYNPVVSVKGILLKNNEPIEVRGVVSSVNMLNRVSNIVVRSNGNQYTIGGYDAELEDIE
AQEVVIESISPNA

Sequences:

>Translated_333_residues
MMGLTNREAEVFLTIAEKGEASVKDILESVDVHQPQLYNILSSLLRRGFIKVSSSRPKKYSAYNLSTIIDTYISSFSSIK
EVVKRIESPIRSSSQIYVSYGIDGLNNGLVEVISNAQVELYGEIPSWILRKNLRLFMDALGRGVRLYLLVYPSISEEDLH
PLREYEDAAWIKVNKLGDFLLLAADLSKGVYASRRSLTVNEGSHCYIIQDKDIITRFLTIFNSTWKESEDALYVDPSRGK
YPRKFLNIHFALLTLEALLTHGYNPVVSVKGILLKNNEPIEVRGVVSSVNMLNRVSNIVVRSNGNQYTIGGYDAELEDIE
AQEVVIESISPNA
>Mature_333_residues
MMGLTNREAEVFLTIAEKGEASVKDILESVDVHQPQLYNILSSLLRRGFIKVSSSRPKKYSAYNLSTIIDTYISSFSSIK
EVVKRIESPIRSSSQIYVSYGIDGLNNGLVEVISNAQVELYGEIPSWILRKNLRLFMDALGRGVRLYLLVYPSISEEDLH
PLREYEDAAWIKVNKLGDFLLLAADLSKGVYASRRSLTVNEGSHCYIIQDKDIITRFLTIFNSTWKESEDALYVDPSRGK
YPRKFLNIHFALLTLEALLTHGYNPVVSVKGILLKNNEPIEVRGVVSSVNMLNRVSNIVVRSNGNQYTIGGYDAELEDIE
AQEVVIESISPNA

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37446; Mature: 37446

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGLTNREAEVFLTIAEKGEASVKDILESVDVHQPQLYNILSSLLRRGFIKVSSSRPKKY
CCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
SAYNLSTIIDTYISSFSSIKEVVKRIESPIRSSSQIYVSYGIDGLNNGLVEVISNAQVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCEEE
YGEIPSWILRKNLRLFMDALGRGVRLYLLVYPSISEEDLHPLREYEDAAWIKVNKLGDFL
EECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHCHHHHHCCCCEEEEEECCCCEE
LLAADLSKGVYASRRSLTVNEGSHCYIIQDKDIITRFLTIFNSTWKESEDALYVDPSRGK
EEEEHHHCCHHHCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
YPRKFLNIHFALLTLEALLTHGYNPVVSVKGILLKNNEPIEVRGVVSSVNMLNRVSNIVV
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHEEE
RSNGNQYTIGGYDAELEDIEAQEVVIESISPNA
ECCCCEEEECCCCCCHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMGLTNREAEVFLTIAEKGEASVKDILESVDVHQPQLYNILSSLLRRGFIKVSSSRPKKY
CCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
SAYNLSTIIDTYISSFSSIKEVVKRIESPIRSSSQIYVSYGIDGLNNGLVEVISNAQVEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCEEE
YGEIPSWILRKNLRLFMDALGRGVRLYLLVYPSISEEDLHPLREYEDAAWIKVNKLGDFL
EECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHCHHHHHCCCCEEEEEECCCCEE
LLAADLSKGVYASRRSLTVNEGSHCYIIQDKDIITRFLTIFNSTWKESEDALYVDPSRGK
EEEEHHHCCHHHCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
YPRKFLNIHFALLTLEALLTHGYNPVVSVKGILLKNNEPIEVRGVVSSVNMLNRVSNIVV
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHEEE
RSNGNQYTIGGYDAELEDIEAQEVVIESISPNA
ECCCCEEEECCCCCCHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA