Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159041179

Identifier: 159041179

GI number: 159041179

Start: 629291

End: 631663

Strand: Reverse

Name: 159041179

Synonym: Cmaq_0600

Alternate gene names: NA

Gene position: 631663-629291 (Counterclockwise)

Preceding gene: 159041180

Following gene: 159041173

Centisome position: 30.4

GC content: 43.11

Gene sequence:

>2373_bases
ATGGGCAAACTAAGTATCTCTAGACATATATGGTTAATACTAGGTGCAATAGTAGTTATGTCAATAAGTATAGCTAGTGC
TCAGTCATCATACCCCACGTACACCCTTTACTATGCAGCACCATGGTACTACGTTGTTGTCCCCCCATGGCCTGCCCCAT
GGTATAACCCATTCTCATCCCTAAGCCTTTGGCCAATATGGTGGGCCAGTGATTATGCGCCATTAGCATTATGGAACCCG
ACTACTAATGAGTTTTGGCCTGTTTTAGCCAGTAATTGGACTGTGTTTCCTCAGAATAAGACCTTGATAATCTACCTTAG
GCATAACTTATATTGGTTTAATGGTTCAGCCACAATACCCTTCACCGCATGGGATGTTTACGCATACTTCTACATTGAGG
CGAAAGCCTTTAATGCATATTCACCTTGGATTAGTCCTCAGAATGCTGATAAGGACATAATAGTGCTTAATAATTACACC
ATTGAATTCCACTTCGATGTATGGTCACCCACAGAGTGGATATTCATACTTATAACCAGGCCTGAAACACCATGGCCAGT
CTGGGAGAACGTAGTAAACGAGTTAAAAACAATGAATGCCAGTGAAGCCTACACCTTTGGGCAGAAGAATATAACTGAAA
TGGTTGTACCATACTGGAGCCTAGGCCCATACTATGCTAGTCACGTTAGTCCACAGACAATTACTGTTCAACTAGTGCCC
CAGCAGTTGTTGACTGAGTGGGGTAGCGTGTTTCCATTCCACACATGGCAATACTACCCAGAGTTAAATGCCTATATTTC
ACTCTCCTCAGGAACAACTCAATTACTTGAATTAATGGCTACCCATAGTAACTTCTTCGTACTTGGGTGGACTGCACCAC
CTTCAACATATCAGGTCGCCATTAAGGATGGTTACGTATTTAACCCAATGCCAGATATCTCAACCATGGGATTCTCAATA
CCGGCATACTACCCATTTAATATTCCTGCTGTCAGACAAGCATTTGCATACATTATCAATAGGACTGAGGCAACCCTAGC
ATGGGGACCGCCACCATACGCCTACTATCCAGTATGGATACTTGCACCAGCCCCAGCTCCTAATGTTGTCCCTGGTCTAT
GGTCAACAATACCCGAAGGCATTAGGAGCATGGTTATTAATTATACTGTTAATTGGTCTTACGCCTCTCAGTTACTTGAA
TCAGCTGGCTTAACCTATAAGAGCGGCCAATGGTACCTACCCAACGGAACACCACTAACACTAACACTATACACCGACGG
GCGTACTGACTGGTTAACCATAAGTTCTGAAATAGCTGCACAATTAGGGAAGTTTGGAATACCAACTAAGGTCATTTCTG
TTGAGGCTGCAACATATTCCACTGAGGAGACTACGTGTAAATTACCTGATAATGTTGATTTCATATATGCAGGCCTTAAT
AAGGGTGGTTATGATACATTCTGGGTTTCCTTAACTTCAGCTCAATGGAATGGCCCTGCATTATTCCCAGCAGCATGGTG
TATTAACGGCACCACTACGCCTTTCGCCTACCCGATTGTTCAGAGTAATCAGATTACCGGCTGGTATTGTAAACCATTAA
CCACCAACCTACCTATACCGAATAATACAATTATCTGGTGCATTAACTCAACCTATGGTCTCATAAACCTAACCAATTGG
GAGGATGCCATAACGGCTGCTGAGCCTGGTTCATCAACATACTATGAGTTAATTAAGGCATTCTACGCATGGTCCGAGTA
CTGGGTACCAGCAATTCAAATAGGTACTGAGGCGATAGCTCAGGGTGCTGTACCTAAGTATGTTAATATGGGGTGGTTAA
TGAAGTGCATACCGTTTAATGCATCTAAGTACAGCGAAGCAGCATACACGTTAGAGTATCCTCATGGAATGTCAGGAGCA
TCCTTCGATACAATAGACTTAGTATTCCTAGGTGGATTCGCACCTCAAGGCGTGATGCCTCCTCTAGCTCAAGCTATTGT
TAATGGTTCATTATGGACTAAGTATCCTCAGTATGCGGCATTCATTGGTTTACCTAATCCTGATCCTCAGTTGCAGGCTT
GTGTAGCATCGTACTTCCATGTACCGTATACTCCAGTTACTTCAACTACAACGACTTCAACGACTACGGCCACAACAACC
TCAACAACCACTGTTACTTCAACTGCCGTTGCTACTGTGACTAGTACTGCCACTGTAACATCAACAAGCACAGTAGTAAG
CACAACAACCACTACGGCAGTAAGCACAGTAACAGTCACAAAACCAGTAATAAGCACAACACTAGTAATAGGAATAGTAA
TCATAGTAATAGTCATAGCCATAGTAGCAGCAGTACTAGCATTAAGAAGATGA

Upstream 100 bases:

>100_bases
ACCATAATGGTGGGTAAGAGCTAGTGAATACTAGTTTCATACTACACTTTTATAGTAATTTCGGAAAACTTTAAATACTA
GTTCTCAGTTTCTAAAATGT

Downstream 100 bases:

>100_bases
AAATGAATCAATGATTAATTAAATTAAAACTATCTTCTTTTCCCTTTATTCCCCTAAACCTATCATGCTCATTAATAGTT
TAAATATTTTAAGGCCTTAT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 790; Mature: 789

Protein sequence:

>790_residues
MGKLSISRHIWLILGAIVVMSISIASAQSSYPTYTLYYAAPWYYVVVPPWPAPWYNPFSSLSLWPIWWASDYAPLALWNP
TTNEFWPVLASNWTVFPQNKTLIIYLRHNLYWFNGSATIPFTAWDVYAYFYIEAKAFNAYSPWISPQNADKDIIVLNNYT
IEFHFDVWSPTEWIFILITRPETPWPVWENVVNELKTMNASEAYTFGQKNITEMVVPYWSLGPYYASHVSPQTITVQLVP
QQLLTEWGSVFPFHTWQYYPELNAYISLSSGTTQLLELMATHSNFFVLGWTAPPSTYQVAIKDGYVFNPMPDISTMGFSI
PAYYPFNIPAVRQAFAYIINRTEATLAWGPPPYAYYPVWILAPAPAPNVVPGLWSTIPEGIRSMVINYTVNWSYASQLLE
SAGLTYKSGQWYLPNGTPLTLTLYTDGRTDWLTISSEIAAQLGKFGIPTKVISVEAATYSTEETTCKLPDNVDFIYAGLN
KGGYDTFWVSLTSAQWNGPALFPAAWCINGTTTPFAYPIVQSNQITGWYCKPLTTNLPIPNNTIIWCINSTYGLINLTNW
EDAITAAEPGSSTYYELIKAFYAWSEYWVPAIQIGTEAIAQGAVPKYVNMGWLMKCIPFNASKYSEAAYTLEYPHGMSGA
SFDTIDLVFLGGFAPQGVMPPLAQAIVNGSLWTKYPQYAAFIGLPNPDPQLQACVASYFHVPYTPVTSTTTTSTTTATTT
STTTVTSTAVATVTSTATVTSTSTVVSTTTTTAVSTVTVTKPVISTTLVIGIVIIVIVIAIVAAVLALRR

Sequences:

>Translated_790_residues
MGKLSISRHIWLILGAIVVMSISIASAQSSYPTYTLYYAAPWYYVVVPPWPAPWYNPFSSLSLWPIWWASDYAPLALWNP
TTNEFWPVLASNWTVFPQNKTLIIYLRHNLYWFNGSATIPFTAWDVYAYFYIEAKAFNAYSPWISPQNADKDIIVLNNYT
IEFHFDVWSPTEWIFILITRPETPWPVWENVVNELKTMNASEAYTFGQKNITEMVVPYWSLGPYYASHVSPQTITVQLVP
QQLLTEWGSVFPFHTWQYYPELNAYISLSSGTTQLLELMATHSNFFVLGWTAPPSTYQVAIKDGYVFNPMPDISTMGFSI
PAYYPFNIPAVRQAFAYIINRTEATLAWGPPPYAYYPVWILAPAPAPNVVPGLWSTIPEGIRSMVINYTVNWSYASQLLE
SAGLTYKSGQWYLPNGTPLTLTLYTDGRTDWLTISSEIAAQLGKFGIPTKVISVEAATYSTEETTCKLPDNVDFIYAGLN
KGGYDTFWVSLTSAQWNGPALFPAAWCINGTTTPFAYPIVQSNQITGWYCKPLTTNLPIPNNTIIWCINSTYGLINLTNW
EDAITAAEPGSSTYYELIKAFYAWSEYWVPAIQIGTEAIAQGAVPKYVNMGWLMKCIPFNASKYSEAAYTLEYPHGMSGA
SFDTIDLVFLGGFAPQGVMPPLAQAIVNGSLWTKYPQYAAFIGLPNPDPQLQACVASYFHVPYTPVTSTTTTSTTTATTT
STTTVTSTAVATVTSTATVTSTSTVVSTTTTTAVSTVTVTKPVISTTLVIGIVIIVIVIAIVAAVLALRR
>Mature_789_residues
GKLSISRHIWLILGAIVVMSISIASAQSSYPTYTLYYAAPWYYVVVPPWPAPWYNPFSSLSLWPIWWASDYAPLALWNPT
TNEFWPVLASNWTVFPQNKTLIIYLRHNLYWFNGSATIPFTAWDVYAYFYIEAKAFNAYSPWISPQNADKDIIVLNNYTI
EFHFDVWSPTEWIFILITRPETPWPVWENVVNELKTMNASEAYTFGQKNITEMVVPYWSLGPYYASHVSPQTITVQLVPQ
QLLTEWGSVFPFHTWQYYPELNAYISLSSGTTQLLELMATHSNFFVLGWTAPPSTYQVAIKDGYVFNPMPDISTMGFSIP
AYYPFNIPAVRQAFAYIINRTEATLAWGPPPYAYYPVWILAPAPAPNVVPGLWSTIPEGIRSMVINYTVNWSYASQLLES
AGLTYKSGQWYLPNGTPLTLTLYTDGRTDWLTISSEIAAQLGKFGIPTKVISVEAATYSTEETTCKLPDNVDFIYAGLNK
GGYDTFWVSLTSAQWNGPALFPAAWCINGTTTPFAYPIVQSNQITGWYCKPLTTNLPIPNNTIIWCINSTYGLINLTNWE
DAITAAEPGSSTYYELIKAFYAWSEYWVPAIQIGTEAIAQGAVPKYVNMGWLMKCIPFNASKYSEAAYTLEYPHGMSGAS
FDTIDLVFLGGFAPQGVMPPLAQAIVNGSLWTKYPQYAAFIGLPNPDPQLQACVASYFHVPYTPVTSTTTTSTTTATTTS
TTTVTSTAVATVTSTATVTSTSTVVSTTTTTAVSTVTVTKPVISTTLVIGIVIIVIVIAIVAAVLALRR

Specific function: Unknown

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87824; Mature: 87692

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLSISRHIWLILGAIVVMSISIASAQSSYPTYTLYYAAPWYYVVVPPWPAPWYNPFSS
CCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCC
LSLWPIWWASDYAPLALWNPTTNEFWPVLASNWTVFPQNKTLIIYLRHNLYWFNGSATIP
CEEEEEEECCCCCCEEEECCCCCCCCHHEECCEEEECCCCEEEEEEEEEEEEECCCEEEE
FTAWDVYAYFYIEAKAFNAYSPWISPQNADKDIIVLNNYTIEFHFDVWSPTEWIFILITR
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEC
PETPWPVWENVVNELKTMNASEAYTFGQKNITEMVVPYWSLGPYYASHVSPQTITVQLVP
CCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCHHHHCCCCCEEEEEECC
QQLLTEWGSVFPFHTWQYYPELNAYISLSSGTTQLLELMATHSNFFVLGWTAPPSTYQVA
HHHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCEEEEE
IKDGYVFNPMPDISTMGFSIPAYYPFNIPAVRQAFAYIINRTEATLAWGPPPYAYYPVWI
EECCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
LAPAPAPNVVPGLWSTIPEGIRSMVINYTVNWSYASQLLESAGLTYKSGQWYLPNGTPLT
EECCCCCCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHCCCEEECCCEECCCCCEEE
LTLYTDGRTDWLTISSEIAAQLGKFGIPTKVISVEAATYSTEETTCKLPDNVDFIYAGLN
EEEEECCCCEEEEECHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEECCCCCEEEEEECC
KGGYDTFWVSLTSAQWNGPALFPAAWCINGTTTPFAYPIVQSNQITGWYCKPLTTNLPIP
CCCCEEEEEEEECCCCCCCEECCEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCC
NNTIIWCINSTYGLINLTNWEDAITAAEPGSSTYYELIKAFYAWSEYWVPAIQIGTEAIA
CCEEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHH
QGAVPKYVNMGWLMKCIPFNASKYSEAAYTLEYPHGMSGASFDTIDLVFLGGFAPQGVMP
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
PLAQAIVNGSLWTKYPQYAAFIGLPNPDPQLQACVASYFHVPYTPVTSTTTTSTTTATTT
HHHHHHHCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
STTTVTSTAVATVTSTATVTSTSTVVSTTTTTAVSTVTVTKPVISTTLVIGIVIIVIVIA
CCEEEEEEEEEEEEECEEEEECCEEEEEEECEEEEEEEEEHHHHHHHHHHHHHHHHHHHH
IVAAVLALRR
HHHHHHHHCC
>Mature Secondary Structure 
GKLSISRHIWLILGAIVVMSISIASAQSSYPTYTLYYAAPWYYVVVPPWPAPWYNPFSS
CCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCC
LSLWPIWWASDYAPLALWNPTTNEFWPVLASNWTVFPQNKTLIIYLRHNLYWFNGSATIP
CEEEEEEECCCCCCEEEECCCCCCCCHHEECCEEEECCCCEEEEEEEEEEEEECCCEEEE
FTAWDVYAYFYIEAKAFNAYSPWISPQNADKDIIVLNNYTIEFHFDVWSPTEWIFILITR
EEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEC
PETPWPVWENVVNELKTMNASEAYTFGQKNITEMVVPYWSLGPYYASHVSPQTITVQLVP
CCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCHHHHCCCCCEEEEEECC
QQLLTEWGSVFPFHTWQYYPELNAYISLSSGTTQLLELMATHSNFFVLGWTAPPSTYQVA
HHHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCEEEEE
IKDGYVFNPMPDISTMGFSIPAYYPFNIPAVRQAFAYIINRTEATLAWGPPPYAYYPVWI
EECCEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE
LAPAPAPNVVPGLWSTIPEGIRSMVINYTVNWSYASQLLESAGLTYKSGQWYLPNGTPLT
EECCCCCCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHCCCEEECCCEECCCCCEEE
LTLYTDGRTDWLTISSEIAAQLGKFGIPTKVISVEAATYSTEETTCKLPDNVDFIYAGLN
EEEEECCCCEEEEECHHHHHHHHCCCCCEEEEEEEEEEECCCCCEEECCCCCEEEEEECC
KGGYDTFWVSLTSAQWNGPALFPAAWCINGTTTPFAYPIVQSNQITGWYCKPLTTNLPIP
CCCCEEEEEEEECCCCCCCEECCEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCCCCC
NNTIIWCINSTYGLINLTNWEDAITAAEPGSSTYYELIKAFYAWSEYWVPAIQIGTEAIA
CCEEEEEEECCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHH
QGAVPKYVNMGWLMKCIPFNASKYSEAAYTLEYPHGMSGASFDTIDLVFLGGFAPQGVMP
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
PLAQAIVNGSLWTKYPQYAAFIGLPNPDPQLQACVASYFHVPYTPVTSTTTTSTTTATTT
HHHHHHHCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
STTTVTSTAVATVTSTATVTSTSTVVSTTTTTAVSTVTVTKPVISTTLVIGIVIIVIVIA
CCEEEEEEEEEEEEECEEEEECCEEEEEEECEEEEEEEEEHHHHHHHHHHHHHHHHHHHH
IVAAVLALRR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA