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The map label for this gene is 159041156

Identifier: 159041156

GI number: 159041156

Start: 607665

End: 608294

Strand: Reverse

Name: 159041156

Synonym: Cmaq_0577

Alternate gene names: NA

Gene position: 608294-607665 (Counterclockwise)

Preceding gene: 159041157

Following gene: 159041154

Centisome position: 29.28

GC content: 45.87

Gene sequence:

>630_bases
ATGCTTAAGGGGAGTTACATTAGGGGGAAGAGGGAGCTTGAGGCTATTATACAGGGTATAGGAGGATATAGTAGGCCTAA
GCTTAAGCTGGAGCAGTACGTCACCGATGCCGACGTGGTGGCTGAGGTTGCTTGGTTAGCCTACCTTAAGGGTGATGTTG
CTGGGAGAAGAGTTATTGATCCAGTCTGCGGTACAGGTAGATTCTCAGCGGCTGCTGCATTACTTGGTTCAACCCAAGTC
GTATGCTCTGATATTGATGAGGATGCGGTAAGGGACGCCTACAGGTACTTGAGTGAATTAAGCTTACTTAATACTGTTGA
TTTTGCAGTTATGGACTTCACAAGGCCAGCTCTCGCAAAGCCGCTGGATACCGTATTCCAGAATCCACCCTTCGGTATAT
GGAGTCCAAGAGGAACTGATATTAAGCTACTCATGGCTTCACTTAACTTATCTAAGGTAACCTACAGTATACATAAGGAG
GGTACTGAGGATTACGTTATTAAGGTGGTTAAGTCATTGGGCAGAAGCATTGAGGTTGCACGCGGGTTTAGGTTAAGTAT
ACCATACACCTATAGGCATCATAGGAAGCCGAGGAGAGTCATTGAGGTTTACGTAATTAGGGTTACGTGA

Upstream 100 bases:

>100_bases
ATTAAGGGAAACCTGCCGTAAAGTCGCCCCAATCCTTAACCCACTGGGTAACTGCACTTAAATCCGTAGTTTAATTAACT
ATTCAACGTGATAAGCATTA

Downstream 100 bases:

>100_bases
GGCGATTAATTGATAATGTGGCTGAATCAATAATGCTTCACTCGATGAATTACCCACTATTTCTCACGGCTTATATTTAG
GTAAGCCCCCATGTAGTATT

Product: putative RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLKGSYIRGKRELEAIIQGIGGYSRPKLKLEQYVTDADVVAEVAWLAYLKGDVAGRRVIDPVCGTGRFSAAAALLGSTQV
VCSDIDEDAVRDAYRYLSELSLLNTVDFAVMDFTRPALAKPLDTVFQNPPFGIWSPRGTDIKLLMASLNLSKVTYSIHKE
GTEDYVIKVVKSLGRSIEVARGFRLSIPYTYRHHRKPRRVIEVYVIRVT

Sequences:

>Translated_209_residues
MLKGSYIRGKRELEAIIQGIGGYSRPKLKLEQYVTDADVVAEVAWLAYLKGDVAGRRVIDPVCGTGRFSAAAALLGSTQV
VCSDIDEDAVRDAYRYLSELSLLNTVDFAVMDFTRPALAKPLDTVFQNPPFGIWSPRGTDIKLLMASLNLSKVTYSIHKE
GTEDYVIKVVKSLGRSIEVARGFRLSIPYTYRHHRKPRRVIEVYVIRVT
>Mature_209_residues
MLKGSYIRGKRELEAIIQGIGGYSRPKLKLEQYVTDADVVAEVAWLAYLKGDVAGRRVIDPVCGTGRFSAAAALLGSTQV
VCSDIDEDAVRDAYRYLSELSLLNTVDFAVMDFTRPALAKPLDTVFQNPPFGIWSPRGTDIKLLMASLNLSKVTYSIHKE
GTEDYVIKVVKSLGRSIEVARGFRLSIPYTYRHHRKPRRVIEVYVIRVT

Specific function: Unknown

COG id: COG2263

COG function: function code J; Predicted RNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI92859575, Length=203, Percent_Identity=33.9901477832512, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17552558, Length=200, Percent_Identity=27, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI221512926, Length=202, Percent_Identity=34.1584158415842, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI28574609, Length=202, Percent_Identity=34.1584158415842, Blast_Score=104, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: NA

Molecular weight: Translated: 23369; Mature: 23369

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGSYIRGKRELEAIIQGIGGYSRPKLKLEQYVTDADVVAEVAWLAYLKGDVAGRRVID
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHCC
PVCGTGRFSAAAALLGSTQVVCSDIDEDAVRDAYRYLSELSLLNTVDFAVMDFTRPALAK
CCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
PLDTVFQNPPFGIWSPRGTDIKLLMASLNLSKVTYSIHKEGTEDYVIKVVKSLGRSIEVA
HHHHHHCCCCCCCCCCCCCCCEEHEECCCHHHHEEEHHCCCCHHHHHHHHHHHCCCEEHH
RGFRLSIPYTYRHHRKPRRVIEVYVIRVT
CCEEEECCCHHHHCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLKGSYIRGKRELEAIIQGIGGYSRPKLKLEQYVTDADVVAEVAWLAYLKGDVAGRRVID
CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHCC
PVCGTGRFSAAAALLGSTQVVCSDIDEDAVRDAYRYLSELSLLNTVDFAVMDFTRPALAK
CCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
PLDTVFQNPPFGIWSPRGTDIKLLMASLNLSKVTYSIHKEGTEDYVIKVVKSLGRSIEVA
HHHHHHCCCCCCCCCCCCCCCEEHEECCCHHHHEEEHHCCCCHHHHHHHHHHHCCCEEHH
RGFRLSIPYTYRHHRKPRRVIEVYVIRVT
CCEEEECCCHHHHCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]