| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041154
Identifier: 159041154
GI number: 159041154
Start: 606023
End: 606856
Strand: Reverse
Name: 159041154
Synonym: Cmaq_0575
Alternate gene names: NA
Gene position: 606856-606023 (Counterclockwise)
Preceding gene: 159041156
Following gene: 159041153
Centisome position: 29.21
GC content: 44.24
Gene sequence:
>834_bases ATGCCCATTCACCTAAGGTGGGAACTCTACCCAGTGCCTCATGAATCACCGAGTAAGGTAAGGTACGGTGGAGGATACTT AGAGGAGGAGCTTTGGTGGTCTAAGGGTAGAGTCACATCAGTGATTGGGGAACTTAAGGAACTGTTTAGTGAAATGCTGT TCATAAAGAGGATTTACAATAATAATAAGAGGCTCTGGGCCCTCACTTACCCATTTCACCTAGGAATATACCTAATACTG GTTTGGTTCCTACTAATACTCCTAGGATCAGTCACTGAGGTATACGCCCACATACCAGTGCCATCAAGTAACGCCTGGTC CATCTTCCTCTACTACATTACGATAATAGTTGGTGGAGCTGGTGCATTATTGGCGGTGACTGGGGGTGTTGGGTTACTGG TTAGGAGGCTTATTAACCCTGTTTTAAGGGATTACACAATTATCTCAGACTACTTCAACCTACTCATAGTACTCTTAGCC TTAGCAACGGGCTTAGCCTCATGGTTCAGTGACCCAAGCTTCAACTACGCTAGGGCGTTTGCATCAAGCCTCCTTAATCC ATTCATGAACCCACCACAGTTAAATACAGTGATACTGATCCACGTCATGGTGCTTCAACTACTTGTATCCTACATACCCT TCTCCAAGATAACCCACTTCATTGGTAAGTACTTCACGTATCATAGGGTTCTTTGGGATGATGAACCAAGCTCCAGTGAA TTAAGCCGCAGGATTGAGGAATTAATGAGACTTAGGATGCCTTGGAGTGCACTCCACATTAAGTCAAATGGATCATGGGA AGATAACGCAAGGGTGATTAATAATGAGAGATGA
Upstream 100 bases:
>100_bases GTGATTACTTACGTTAACCCAATTACTTAGATTCACATCCTACGCCGCAGTATTAATCTTCGCAGTTGGTATTGCGTATA AGTGGCGTAAATGGTCATCA
Downstream 100 bases:
>100_bases GAAGGTGGTTAGGATAAGGGATATAGGTAGGCGTGAGGGTAGGTTAATTAAGATAAGCCTAAGTGACTTAATGCCTCTAC CACCACCCTACGATAAGCCT
Product: nitrate reductase subunit gamma
Products: NA
Alternate protein names: Nitrate Reductase Gamma Subunit Subfamily
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPIHLRWELYPVPHESPSKVRYGGGYLEEELWWSKGRVTSVIGELKELFSEMLFIKRIYNNNKRLWALTYPFHLGIYLIL VWFLLILLGSVTEVYAHIPVPSSNAWSIFLYYITIIVGGAGALLAVTGGVGLLVRRLINPVLRDYTIISDYFNLLIVLLA LATGLASWFSDPSFNYARAFASSLLNPFMNPPQLNTVILIHVMVLQLLVSYIPFSKITHFIGKYFTYHRVLWDDEPSSSE LSRRIEELMRLRMPWSALHIKSNGSWEDNARVINNER
Sequences:
>Translated_277_residues MPIHLRWELYPVPHESPSKVRYGGGYLEEELWWSKGRVTSVIGELKELFSEMLFIKRIYNNNKRLWALTYPFHLGIYLIL VWFLLILLGSVTEVYAHIPVPSSNAWSIFLYYITIIVGGAGALLAVTGGVGLLVRRLINPVLRDYTIISDYFNLLIVLLA LATGLASWFSDPSFNYARAFASSLLNPFMNPPQLNTVILIHVMVLQLLVSYIPFSKITHFIGKYFTYHRVLWDDEPSSSE LSRRIEELMRLRMPWSALHIKSNGSWEDNARVINNER >Mature_276_residues PIHLRWELYPVPHESPSKVRYGGGYLEEELWWSKGRVTSVIGELKELFSEMLFIKRIYNNNKRLWALTYPFHLGIYLILV WFLLILLGSVTEVYAHIPVPSSNAWSIFLYYITIIVGGAGALLAVTGGVGLLVRRLINPVLRDYTIISDYFNLLIVLLAL ATGLASWFSDPSFNYARAFASSLLNPFMNPPQLNTVILIHVMVLQLLVSYIPFSKITHFIGKYFTYHRVLWDDEPSSSEL SRRIEELMRLRMPWSALHIKSNGSWEDNARVINNER
Specific function: Unknown
COG id: COG2181
COG function: function code C; Nitrate reductase gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31935; Mature: 31804
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHLRWELYPVPHESPSKVRYGGGYLEEELWWSKGRVTSVIGELKELFSEMLFIKRIYN CCEEEEEEEEECCCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC NNKRLWALTYPFHLGIYLILVWFLLILLGSVTEVYAHIPVPSSNAWSIFLYYITIIVGGA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC GALLAVTGGVGLLVRRLINPVLRDYTIISDYFNLLIVLLALATGLASWFSDPSFNYARAF CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASSLLNPFMNPPQLNTVILIHVMVLQLLVSYIPFSKITHFIGKYFTYHRVLWDDEPSSSE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHH LSRRIEELMRLRMPWSALHIKSNGSWEDNARVINNER HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PIHLRWELYPVPHESPSKVRYGGGYLEEELWWSKGRVTSVIGELKELFSEMLFIKRIYN CEEEEEEEEECCCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC NNKRLWALTYPFHLGIYLILVWFLLILLGSVTEVYAHIPVPSSNAWSIFLYYITIIVGGA CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC GALLAVTGGVGLLVRRLINPVLRDYTIISDYFNLLIVLLALATGLASWFSDPSFNYARAF CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASSLLNPFMNPPQLNTVILIHVMVLQLLVSYIPFSKITHFIGKYFTYHRVLWDDEPSSSE HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHH LSRRIEELMRLRMPWSALHIKSNGSWEDNARVINNER HHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA