| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is xpt [H]
Identifier: 159041144
GI number: 159041144
Start: 596627
End: 597355
Strand: Reverse
Name: xpt [H]
Synonym: Cmaq_0563
Alternate gene names: 159041144
Gene position: 597355-596627 (Counterclockwise)
Preceding gene: 159041145
Following gene: 159041143
Centisome position: 28.75
GC content: 41.84
Gene sequence:
>729_bases ATGATGAGGAGGAGGGAGAAGGTTGGTCTACAATTGGATGCCGTGTTCTACATTAATGCAGTTAAGAGGGTTTACTCACT ATCCTTTAAGCAACTATCAAGCATGCTCAATATACCTGAATCCACACTATGCCGTTACGCTAACATGGAGGTTTTACCCT CAGCTAAGGTTGCGGAGAGTATTGTTAAGGTTCTTAAACCCATGGCTGATATTAGGAGTGTTGTCTCTAAGTTGATTAAG GTTAATGGTAATTACATTGACTTAAGTTCCATAGTCCTTGAACCAATGGTGCTTAGGCTTTACGAGAAGCATGTTCTCGA GACCTTCTCTGGGTTAAGGGTTACTAAGGTACTTACCGCAGCTGTGGATGGTATACCATTAGCCATGGCGGCGTCATACG CCTTAAACGCTGAATTAACAATAGCTAAGCAGTACATGGATGCCGGTTTTGAGCAGTACTATGAGGCTACTTACATGGTT GACTCACCGCCCAGGAAGGTTAACTTATACATACCTAAGCCATTACTAACTAAGGATGACTCAGTAATACTCATTGATGA TATTGTTAGATCAGGGAGAACAATGGATGCATTACTAAGCATAATAAGGCAATCAGGGGCAAGCATAGTGGGAGTATCTA TACTTGTGGCTGCCAGTAAGGATGTTGCAAAGGCTATTAGGAGTAAGGTAAGTGGAGTAGTGTTAGACGTAATATACACT ATTGAGTAG
Upstream 100 bases:
>100_bases GCCGGCGCCGATCACCAATATTAGGTGTTTGTTTTGGTTTTTAAACATTTCAGTCCATTAAATCAGTTAGGTTTAATAAT CCCTTTACTCAACTGATTTA
Downstream 100 bases:
>100_bases CCTAAACTGTTTCCCGTACGTATGCAATACTTATAAACTAAGACTAAGACTCAGATATATGAGTATAAGCGTTGCAGTGG TGATGAATGAGGCTTTTAAG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: XPRTase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MMRRREKVGLQLDAVFYINAVKRVYSLSFKQLSSMLNIPESTLCRYANMEVLPSAKVAESIVKVLKPMADIRSVVSKLIK VNGNYIDLSSIVLEPMVLRLYEKHVLETFSGLRVTKVLTAAVDGIPLAMAASYALNAELTIAKQYMDAGFEQYYEATYMV DSPPRKVNLYIPKPLLTKDDSVILIDDIVRSGRTMDALLSIIRQSGASIVGVSILVAASKDVAKAIRSKVSGVVLDVIYT IE
Sequences:
>Translated_242_residues MMRRREKVGLQLDAVFYINAVKRVYSLSFKQLSSMLNIPESTLCRYANMEVLPSAKVAESIVKVLKPMADIRSVVSKLIK VNGNYIDLSSIVLEPMVLRLYEKHVLETFSGLRVTKVLTAAVDGIPLAMAASYALNAELTIAKQYMDAGFEQYYEATYMV DSPPRKVNLYIPKPLLTKDDSVILIDDIVRSGRTMDALLSIIRQSGASIVGVSILVAASKDVAKAIRSKVSGVVLDVIYT IE >Mature_242_residues MMRRREKVGLQLDAVFYINAVKRVYSLSFKQLSSMLNIPESTLCRYANMEVLPSAKVAESIVKVLKPMADIRSVVSKLIK VNGNYIDLSSIVLEPMVLRLYEKHVLETFSGLRVTKVLTAAVDGIPLAMAASYALNAELTIAKQYMDAGFEQYYEATYMV DSPPRKVNLYIPKPLLTKDDSVILIDDIVRSGRTMDALLSIIRQSGASIVGVSILVAASKDVAKAIRSKVSGVVLDVIYT IE
Specific function: Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. Xpt subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR010079 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.22 [H]
Molecular weight: Translated: 26740; Mature: 26740
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRREKVGLQLDAVFYINAVKRVYSLSFKQLSSMLNIPESTLCRYANMEVLPSAKVAES CCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHH IVKVLKPMADIRSVVSKLIKVNGNYIDLSSIVLEPMVLRLYEKHVLETFSGLRVTKVLTA HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AVDGIPLAMAASYALNAELTIAKQYMDAGFEQYYEATYMVDSPPRKVNLYIPKPLLTKDD HHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEECCCCCCCCC SVILIDDIVRSGRTMDALLSIIRQSGASIVGVSILVAASKDVAKAIRSKVSGVVLDVIYT CEEEEHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHEECCHHHHHHHHHHHHHHHHHEEEE IE CC >Mature Secondary Structure MMRRREKVGLQLDAVFYINAVKRVYSLSFKQLSSMLNIPESTLCRYANMEVLPSAKVAES CCCCHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHH IVKVLKPMADIRSVVSKLIKVNGNYIDLSSIVLEPMVLRLYEKHVLETFSGLRVTKVLTA HHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AVDGIPLAMAASYALNAELTIAKQYMDAGFEQYYEATYMVDSPPRKVNLYIPKPLLTKDD HHCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEECCCCCCCCC SVILIDDIVRSGRTMDALLSIIRQSGASIVGVSILVAASKDVAKAIRSKVSGVVLDVIYT CEEEEHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHEECCHHHHHHHHHHHHHHHHHEEEE IE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA