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The map label for this gene is 159041125

Identifier: 159041125

GI number: 159041125

Start: 577820

End: 578035

Strand: Reverse

Name: 159041125

Synonym: Cmaq_0544

Alternate gene names: NA

Gene position: 578035-577820 (Counterclockwise)

Preceding gene: 159041128

Following gene: 159041124

Centisome position: 27.82

GC content: 53.7

Gene sequence:

>216_bases
ATGGCGGCAGTAAGTGCACGCTCTAGGCCGAGGCCGAAGCTTTATGGACCAGAGGTTTACTACTGTACATCATGCGGTAG
CCCAATTGCGCCATTTAAGAGGGCAACCCACTTCCTATGCCCAAACTGCGGTAAATATGAGATTTGGAGGTGCGAACGCT
GTAGGAGGGAGGGAAATACCTACAAGTGCCCGGTCTGCGGCTTTGAGGGCCCCTAA

Upstream 100 bases:

>100_bases
TAGTTGTTAATAAGGTTTTTCATATTCCACTATTCTGAGGCGCAATGAAGTAACCCTAAGTCCGCTAAATCCTTAAAAAC
ACTTAAATTAGTGGCTGGTA

Downstream 100 bases:

>100_bases
TTAAGTGTCTAAATATTACTTCCCGCTTAACCTCAATATTAAATTAAGTGGATCCTGGTTAGAATCAAAGGAGGCTTAAT
TATGGGTTCCCCATGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MAAVSARSRPRPKLYGPEVYYCTSCGSPIAPFKRATHFLCPNCGKYEIWRCERCRREGNTYKCPVCGFEGP

Sequences:

>Translated_71_residues
MAAVSARSRPRPKLYGPEVYYCTSCGSPIAPFKRATHFLCPNCGKYEIWRCERCRREGNTYKCPVCGFEGP
>Mature_70_residues
AAVSARSRPRPKLYGPEVYYCTSCGSPIAPFKRATHFLCPNCGKYEIWRCERCRREGNTYKCPVCGFEGP

Specific function: Unknown

COG id: COG2888

COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011668 [H]

Pfam domain/function: PF07754 DUF1610 [H]

EC number: NA

Molecular weight: Translated: 8067; Mature: 7936

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
12.7 %Cys+Met (Translated Protein)
11.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVSARSRPRPKLYGPEVYYCTSCGSPIAPFKRATHFLCPNCGKYEIWRCERCRREGNT
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHCCCC
YKCPVCGFEGP
EECCCCCCCCC
>Mature Secondary Structure 
AAVSARSRPRPKLYGPEVYYCTSCGSPIAPFKRATHFLCPNCGKYEIWRCERCRREGNT
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEEHHHHHHCCCC
YKCPVCGFEGP
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]