BacMap

Definition	Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession	NC_009954
Length	2,077,567

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The map label for this gene is fabG [H]

Identifier: 159041101

GI number: 159041101

Start: 551389

End: 552135

Strand: Reverse

Name: fabG [H]

Synonym: Cmaq_0518

Alternate gene names: 159041101

Gene position: 552135-551389 (Counterclockwise)

Preceding gene: 159041103

Following gene: 159041100

Centisome position: 26.58

GC content: 43.64

Gene sequence:

>747_bases
ATGGTGGATTCAATTAAAGGTAAGACAGCCCTAGTGACTGGTGGCTCAAGTAGAATAGGTAGGGTGATTTGTAATTACCT
GGCTAGGGAGGGGGTTAATGTGGTGGTTCACTATAATTCATCCATGGAGGAGGCCCTTAAGGTTAAGGAGGAGATTAATG
GTTTAGGGGTTGAATCATGGATTATTAAAGCGGATTTATCCAAGCCCAGTGAGGTTAATGAATTAATTAATGAATCCTTT
AAGCAGGCCGGTGAGGTTAACTTCCTAATTAATAATGCCTCAGTATTCCCTAAGATAGGGTTAAGCGACTTAAGCATTAG
TGACTTAAATCGGATCATGCAGGTGAATGCCTGGGCACCATTAATGCTTACCCTGAGGTTCGCTAGTATGGTTAATGAAG
GTAAGGTAGTTAATGTACTGGACTCAATAGTGGATGGGTATAATTTCGAGAGGTACGCCTACTACCTAAGCAAGATCATG
CTTAATGCAGTAACAAGATCCCTGGCCCTTAAATTAGCCCCAAGGATAACCGTTAACGCCGTCGCCCCCGGCATTATACT
TCCAGCTAAGGATGAGAATACTGAACGCATAGAGGCTATGGTTAATCAAGTCCCCTTAAGGAGACGTGGATCACCTGATG
ATGTCGCCCACGCCGTAGTGTTTCTGCTTAAGAGTAGTTACGTAACTGGTCAAGTAATATATGTTGACGGTGGGGAGCAT
CTTAAGCCCAGGGTGGTTTATGAATGA

Upstream 100 bases:

>100_bases
GGGGTATATTTGAATGATGAATTAACTCATTGTGAAGCAGCATCTAGTTACTGCATTACTAGTAGCGGAATAAATATGAG
TACACCTAGTAGGCTTGGTT

Downstream 100 bases:

>100_bases
GCATGGGTTTATTCAAGATAGAGATTAGGGGGCTTAAGGTTAATACAATCATTGGGGTGAAGCCCAGTGAGAGGGCAAGG
CCCCAGCCTGTGGTTATTAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MVDSIKGKTALVTGGSSRIGRVICNYLAREGVNVVVHYNSSMEEALKVKEEINGLGVESWIIKADLSKPSEVNELINESF
KQAGEVNFLINNASVFPKIGLSDLSISDLNRIMQVNAWAPLMLTLRFASMVNEGKVVNVLDSIVDGYNFERYAYYLSKIM
LNAVTRSLALKLAPRITVNAVAPGIILPAKDENTERIEAMVNQVPLRRRGSPDDVAHAVVFLLKSSYVTGQVIYVDGGEH
LKPRVVYE

Sequences:

>Translated_248_residues
MVDSIKGKTALVTGGSSRIGRVICNYLAREGVNVVVHYNSSMEEALKVKEEINGLGVESWIIKADLSKPSEVNELINESF
KQAGEVNFLINNASVFPKIGLSDLSISDLNRIMQVNAWAPLMLTLRFASMVNEGKVVNVLDSIVDGYNFERYAYYLSKIM
LNAVTRSLALKLAPRITVNAVAPGIILPAKDENTERIEAMVNQVPLRRRGSPDDVAHAVVFLLKSSYVTGQVIYVDGGEH
LKPRVVYE
>Mature_248_residues
MVDSIKGKTALVTGGSSRIGRVICNYLAREGVNVVVHYNSSMEEALKVKEEINGLGVESWIIKADLSKPSEVNELINESF
KQAGEVNFLINNASVFPKIGLSDLSISDLNRIMQVNAWAPLMLTLRFASMVNEGKVVNVLDSIVDGYNFERYAYYLSKIM
LNAVTRSLALKLAPRITVNAVAPGIILPAKDENTERIEAMVNQVPLRRRGSPDDVAHAVVFLLKSSYVTGQVIYVDGGEH
LKPRVVYE

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=34.4398340248963, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=29.718875502008, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=31.1203319502075, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=27.9527559055118, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI33667109, Length=184, Percent_Identity=32.0652173913043, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=30.6122448979592, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=31.2, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=31.5573770491803, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=30.3643724696356, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=28.2157676348548, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787891, Length=250, Percent_Identity=28, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=28.1124497991968, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=30.6513409961686, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=28.2786885245902, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=27.8688524590164, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=24.4897959183673, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=27.3076923076923, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=33.7164750957854, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=32.9545454545455, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=30.1526717557252, Blast_Score=90, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=28.996282527881, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=29.7709923664122, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=30.7086614173228, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=32.8301886792453, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=33.8775510204082, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=31.496062992126, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=29.9625468164794, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=29.8850574712644, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=29.7709923664122, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=30.8880308880309, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=28.2442748091603, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=30.5019305019305, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=29.9610894941634, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=29.2181069958848, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=28.996282527881, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=25.6704980842912, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.8625954198473, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=29.6, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=27.8625954198473, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=27.1653543307087, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=259, Percent_Identity=25.8687258687259, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=31.9066147859922, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=31.4176245210728, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=30.8300395256917, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=29.4573643410853, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644337, Length=206, Percent_Identity=32.0388349514563, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=28.6852589641434, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=27.6422764227642, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355631, Length=131, Percent_Identity=35.1145038167939, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27325; Mature: 27325

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSIKGKTALVTGGSSRIGRVICNYLAREGVNVVVHYNSSMEEALKVKEEINGLGVESW
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCHHHE
IIKADLSKPSEVNELINESFKQAGEVNFLINNASVFPKIGLSDLSISDLNRIMQVNAWAP
EEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHH
LMLTLRFASMVNEGKVVNVLDSIVDGYNFERYAYYLSKIMLNAVTRSLALKLAPRITVNA
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VAPGIILPAKDENTERIEAMVNQVPLRRRGSPDDVAHAVVFLLKSSYVTGQVIYVDGGEH
CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
LKPRVVYE
CCCEEECC
>Mature Secondary Structure
MVDSIKGKTALVTGGSSRIGRVICNYLAREGVNVVVHYNSSMEEALKVKEEINGLGVESW
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCHHHE
IIKADLSKPSEVNELINESFKQAGEVNFLINNASVFPKIGLSDLSISDLNRIMQVNAWAP
EEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHH
LMLTLRFASMVNEGKVVNVLDSIVDGYNFERYAYYLSKIMLNAVTRSLALKLAPRITVNA
HHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
VAPGIILPAKDENTERIEAMVNQVPLRRRGSPDDVAHAVVFLLKSSYVTGQVIYVDGGEH
CCCCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
LKPRVVYE
CCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA