| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041097
Identifier: 159041097
GI number: 159041097
Start: 548974
End: 549201
Strand: Reverse
Name: 159041097
Synonym: Cmaq_0514
Alternate gene names: NA
Gene position: 549201-548974 (Counterclockwise)
Preceding gene: 159041100
Following gene: 159041094
Centisome position: 26.43
GC content: 46.49
Gene sequence:
>228_bases ATGCCCCTTAGGGTTGAGTTGGTTGACTGCAGGAACAGTAACATGAATGGGTTAAGGGGTTTAGTGATTGGGCAAACTGA AGGCACCATTAGGCTCCTCACTGAGACTGGGAGGGTGTTGATTATACCGGTTAAGTCATGCAGGTACTACGTTTGGTTAA ACAACTGCATAATACTAGTGACTCCCAGGGGGCTTAGGAGACTTGTTAGGAGGGTTAATGCACAGTAA
Upstream 100 bases:
>100_bases GATGGGGATTTAACCCCACCCATGATCCCAGCCCCTCCGGGCGGGGTACATTCCTTGAGGTAAGTTAACGCATATTAAAG GGTAAGTGGCTTAAGTTAAC
Downstream 100 bases:
>100_bases GTAGGTAACCCAGTGCGGAGTAAATTGTGAGTAAAGTAACCTTACTTAACTCAAAGGAGAAGCCTAACACATCACCATTA ACAAACCCTAACCTAGAGTG
Product: ribonuclease P, Rpp29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPLRVELVDCRNSNMNGLRGLVIGQTEGTIRLLTETGRVLIIPVKSCRYYVWLNNCIILVTPRGLRRLVRRVNAQ
Sequences:
>Translated_75_residues MPLRVELVDCRNSNMNGLRGLVIGQTEGTIRLLTETGRVLIIPVKSCRYYVWLNNCIILVTPRGLRRLVRRVNAQ >Mature_74_residues PLRVELVDCRNSNMNGLRGLVIGQTEGTIRLLTETGRVLIIPVKSCRYYVWLNNCIILVTPRGLRRLVRRVNAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8592; Mature: 8461
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRVELVDCRNSNMNGLRGLVIGQTEGTIRLLTETGRVLIIPVKSCRYYVWLNNCIILV CCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEECCEEEEE TPRGLRRLVRRVNAQ CCHHHHHHHHHHCCC >Mature Secondary Structure PLRVELVDCRNSNMNGLRGLVIGQTEGTIRLLTETGRVLIIPVKSCRYYVWLNNCIILV CEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEECCEEEEE TPRGLRRLVRRVNAQ CCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA