| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is tenA [H]
Identifier: 159041063
GI number: 159041063
Start: 518801
End: 519463
Strand: Reverse
Name: tenA [H]
Synonym: Cmaq_0480
Alternate gene names: 159041063
Gene position: 519463-518801 (Counterclockwise)
Preceding gene: 159041066
Following gene: 159041062
Centisome position: 25.0
GC content: 43.74
Gene sequence:
>663_bases ATGACTAAGTTAAGTGAAGTCCTCTGGTCAAGTATTAGGGATGTCTATGACGCAATAATTAAGCACCCATTCATTAGGGG TTTAGCTGATGGTTCATTAAGTGAGGATATGTTCAAGTACTACATTATCCAAGACCACATGTATCTTGGGGAGTACATTA AGGCGTTGTCAATAATAGCCGCCAAGGCACCTAGGATTGAGGAGGCTCAATTATTCCTAAGACACTCAATAGGTGCCATT GAGGTTGAGAGGAGGCTTCATGAACACTACATGAGGATATGGAACCTTAACCCAGCGGAGTACGTAATGTCACCCACTAA TAGGGCGTACACAAGCTTCCTCATAACTGAAGCCTACTCTAAACCCTACTACGAGGCCATTGCGGCAGTGTTACCATGCT ACTGGATTTACGAGAAGGTTGGGGTTGAGTTATCTAAGCATGAGGTTAGTAATGAGAATTACAGGCTATGGGTCTCAACG TACAGTGGGGAGGAGTATAGGGCATCCGTTAGGGAGGTATTGAGTATAGTAGACTCAATGAACGTTACTGAGAGTCAATT AAATGACATGATTAAGGCATTCAGACTAGCCTCAATATACGAGTACATGTTCTGGGACAGTGCCTACAGGATGGAGAAGT GGCCAATAAACCCAAACCCCTAA
Upstream 100 bases:
>100_bases AAAGCCTAAAATTAATGATACTTTAATTAATGCATAACTAACCCCTTAAGTACGCGGCCCAGCAATAACACTTTTATAGG CAACCTAATACTTCCTAATA
Downstream 100 bases:
>100_bases TCAATTAGGACGTGAAACAATGGAACCAAGACCTTTAAAATCAACATGAATGTGAATTAATGTTAATTTACGCATTATCT TACATTGCCTTAACTCTTAA
Product: TenA family transcription regulator
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTKLSEVLWSSIRDVYDAIIKHPFIRGLADGSLSEDMFKYYIIQDHMYLGEYIKALSIIAAKAPRIEEAQLFLRHSIGAI EVERRLHEHYMRIWNLNPAEYVMSPTNRAYTSFLITEAYSKPYYEAIAAVLPCYWIYEKVGVELSKHEVSNENYRLWVST YSGEEYRASVREVLSIVDSMNVTESQLNDMIKAFRLASIYEYMFWDSAYRMEKWPINPNP
Sequences:
>Translated_220_residues MTKLSEVLWSSIRDVYDAIIKHPFIRGLADGSLSEDMFKYYIIQDHMYLGEYIKALSIIAAKAPRIEEAQLFLRHSIGAI EVERRLHEHYMRIWNLNPAEYVMSPTNRAYTSFLITEAYSKPYYEAIAAVLPCYWIYEKVGVELSKHEVSNENYRLWVST YSGEEYRASVREVLSIVDSMNVTESQLNDMIKAFRLASIYEYMFWDSAYRMEKWPINPNP >Mature_219_residues TKLSEVLWSSIRDVYDAIIKHPFIRGLADGSLSEDMFKYYIIQDHMYLGEYIKALSIIAAKAPRIEEAQLFLRHSIGAIE VERRLHEHYMRIWNLNPAEYVMSPTNRAYTSFLITEAYSKPYYEAIAAVLPCYWIYEKVGVELSKHEVSNENYRLWVSTY SGEEYRASVREVLSIVDSMNVTESQLNDMIKAFRLASIYEYMFWDSAYRMEKWPINPNP
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324517, Length=212, Percent_Identity=24.5283018867925, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325378, Length=210, Percent_Identity=25.2380952380952, Blast_Score=69, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324997, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 25901; Mature: 25770
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLSEVLWSSIRDVYDAIIKHPFIRGLADGSLSEDMFKYYIIQDHMYLGEYIKALSIIA CCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAPRIEEAQLFLRHSIGAIEVERRLHEHYMRIWNLNPAEYVMSPTNRAYTSFLITEAYS HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHC KPYYEAIAAVLPCYWIYEKVGVELSKHEVSNENYRLWVSTYSGEEYRASVREVLSIVDSM CHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC NVTESQLNDMIKAFRLASIYEYMFWDSAYRMEKWPINPNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKLSEVLWSSIRDVYDAIIKHPFIRGLADGSLSEDMFKYYIIQDHMYLGEYIKALSIIA CHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAPRIEEAQLFLRHSIGAIEVERRLHEHYMRIWNLNPAEYVMSPTNRAYTSFLITEAYS HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHC KPYYEAIAAVLPCYWIYEKVGVELSKHEVSNENYRLWVSTYSGEEYRASVREVLSIVDSM CHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC NVTESQLNDMIKAFRLASIYEYMFWDSAYRMEKWPINPNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]