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The map label for this gene is ydiS [H]

Identifier: 159041062

GI number: 159041062

Start: 517074

End: 518351

Strand: Reverse

Name: ydiS [H]

Synonym: Cmaq_0479

Alternate gene names: 159041062

Gene position: 518351-517074 (Counterclockwise)

Preceding gene: 159041063

Following gene: 159041061

Centisome position: 24.95

GC content: 49.06

Gene sequence:

>1278_bases
GTGAGTCAAAGGTTTGACGTCATAGTTGTGGGCGCCGGGCCAGGTGGATTAACGGCTGCCCAGAGGTTGGCCTCAGGGGG
ATTTAAGGTTCTAGTGGTTGAGAGGGGTCGTAGGCCTGGGAGTAAGAACGTCTACGGTGGTAGAATATACGCCCACGTCC
TCGATAAACTCTACCCAGAGTACGTTAAGGAGGCTCCAGTGGAGCGTTGGGTTAGGAAGGAGCGCTTAACAATGCTGACT
AAGGATAGTGGGGTAACTGTTGAGTTTGAGACTAAGGCCACTGAGCATAAGTCCTTCACAGCATACCTATCCAGCTTCAC
TGAGTGGCTGGATAGGAAGGCTGAGGCCGCTGGGGCACTTGTGGTTACTGAAACCCCTGTGGATAGTTTAATCACTAAGG
ATGGTAAGGTCATTGGTATTAGGTCCGGGAGCGATGAGGTCTACGGTGACGTAGTTATTGTGGCTGAGGGCATTAATAGG
CTTGTCCTAGAATCAAGCGGCCTAGCCCCGAAGCTTCAACCAAGCGTGGTTGGACTTGGGGTTAAGGAGGTTATTAAGTT
GAGTAGGGGTGAGATTAATGAGAGGTTTAACCTAGATGAGGATGAGGGCCTAGCCTGGGCCCTGGCAGGGTACCCAACCC
ACTACGTACCCGGTGGAGCATTCCTATACACTAATAAGGATGCGGTAACACTGGGTATTGTTGTTTACCTTGAGCATGGT
AATAAACTTGACGTGCCTGTTTACGACCTAATAGAGGAGTTTAGGCTACACCCATTCATAAGTAGGCTACTTAAGGGTGG
TCAATTACTGGAGTACTCAGCGCACTTAACGCCCATAGCAGGCTTAAAGGCGATGCCGCCTAGGCTATACGGTAACGGTT
ACCTAGTGGTCGGTGATGCCGCAGGCTTCCTGCTTCATCTGGGTGTTTTAATTAGGGGTGTTGACTTCGCAATGGAGAGT
GGTAGACTTGCCGCTGAGGCGGTTATTAAGGCTCATGACCAGGGTAAATATGATGAGGAGGCCCTATCCGTTTACCAGCA
GTTGCTTAATGAAAGTTTCGTACTCAGGGAGTTCAACACTTTTAAGAATGCCCACAAGGTCTTAAATAACCCCAGATTGT
ACAGTGACTACGTTATGCTCGCTAACGCATTCATGAGCAGGTACTTTGATGTTGATGGGACACCTAGGAGGATTTGGGAC
ACTTTCATGAAGGCTAAGGGTAATTTAACCCTAGTTGACTTAACTAAGGACGCCTTAAGCCTGGTGATGAACCTATGA

Upstream 100 bases:

>100_bases
ATTAGAGGTTTACTTGTTTTAGTTTAAGCGAATTCATATTAGTCAAATGTTGATTTTGTTATAAATAATGCTTAATAACA
ACCAGTGATGAGGGGTCATT

Downstream 100 bases:

>100_bases
GTATGGATAATAGGAGAATACCCATTGAGGAGAGGCTTAACTCAAACGCCTGGGATGTTAGCCAGAGGCCGCATATTAGG
ATAATTGACCCTGATAAGTG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSQRFDVIVVGAGPGGLTAAQRLASGGFKVLVVERGRRPGSKNVYGGRIYAHVLDKLYPEYVKEAPVERWVRKERLTMLT
KDSGVTVEFETKATEHKSFTAYLSSFTEWLDRKAEAAGALVVTETPVDSLITKDGKVIGIRSGSDEVYGDVVIVAEGINR
LVLESSGLAPKLQPSVVGLGVKEVIKLSRGEINERFNLDEDEGLAWALAGYPTHYVPGGAFLYTNKDAVTLGIVVYLEHG
NKLDVPVYDLIEEFRLHPFISRLLKGGQLLEYSAHLTPIAGLKAMPPRLYGNGYLVVGDAAGFLLHLGVLIRGVDFAMES
GRLAAEAVIKAHDQGKYDEEALSVYQQLLNESFVLREFNTFKNAHKVLNNPRLYSDYVMLANAFMSRYFDVDGTPRRIWD
TFMKAKGNLTLVDLTKDALSLVMNL

Sequences:

>Translated_425_residues
MSQRFDVIVVGAGPGGLTAAQRLASGGFKVLVVERGRRPGSKNVYGGRIYAHVLDKLYPEYVKEAPVERWVRKERLTMLT
KDSGVTVEFETKATEHKSFTAYLSSFTEWLDRKAEAAGALVVTETPVDSLITKDGKVIGIRSGSDEVYGDVVIVAEGINR
LVLESSGLAPKLQPSVVGLGVKEVIKLSRGEINERFNLDEDEGLAWALAGYPTHYVPGGAFLYTNKDAVTLGIVVYLEHG
NKLDVPVYDLIEEFRLHPFISRLLKGGQLLEYSAHLTPIAGLKAMPPRLYGNGYLVVGDAAGFLLHLGVLIRGVDFAMES
GRLAAEAVIKAHDQGKYDEEALSVYQQLLNESFVLREFNTFKNAHKVLNNPRLYSDYVMLANAFMSRYFDVDGTPRRIWD
TFMKAKGNLTLVDLTKDALSLVMNL
>Mature_424_residues
SQRFDVIVVGAGPGGLTAAQRLASGGFKVLVVERGRRPGSKNVYGGRIYAHVLDKLYPEYVKEAPVERWVRKERLTMLTK
DSGVTVEFETKATEHKSFTAYLSSFTEWLDRKAEAAGALVVTETPVDSLITKDGKVIGIRSGSDEVYGDVVIVAEGINRL
VLESSGLAPKLQPSVVGLGVKEVIKLSRGEINERFNLDEDEGLAWALAGYPTHYVPGGAFLYTNKDAVTLGIVVYLEHGN
KLDVPVYDLIEEFRLHPFISRLLKGGQLLEYSAHLTPIAGLKAMPPRLYGNGYLVVGDAAGFLLHLGVLIRGVDFAMESG
RLAAEAVIKAHDQGKYDEEALSVYQQLLNESFVLREFNTFKNAHKVLNNPRLYSDYVMLANAFMSRYFDVDGTPRRIWDT
FMKAKGNLTLVDLTKDALSLVMNL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=409, Percent_Identity=26.8948655256724, Blast_Score=105, Evalue=7e-23,
Organism=Escherichia coli, GI1787991, Length=420, Percent_Identity=40.4761904761905, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI1786227, Length=419, Percent_Identity=38.6634844868735, Blast_Score=300, Evalue=9e-83,
Organism=Escherichia coli, GI87082155, Length=377, Percent_Identity=34.7480106100796, Blast_Score=233, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI25144720, Length=405, Percent_Identity=28.8888888888889, Blast_Score=122, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6324932, Length=412, Percent_Identity=28.3980582524272, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24652256, Length=405, Percent_Identity=26.1728395061728, Blast_Score=117, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 46921; Mature: 46789

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRFDVIVVGAGPGGLTAAQRLASGGFKVLVVERGRRPGSKNVYGGRIYAHVLDKLYPE
CCCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
YVKEAPVERWVRKERLTMLTKDSGVTVEFETKATEHKSFTAYLSSFTEWLDRKAEAAGAL
HHHHCHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
VVTETPVDSLITKDGKVIGIRSGSDEVYGDVVIVAEGINRLVLESSGLAPKLQPSVVGLG
EEECCCHHHHHCCCCCEEEEECCCCCHHCCEEEEECCCCEEEEECCCCCCCCCCHHCCCC
VKEVIKLSRGEINERFNLDEDEGLAWALAGYPTHYVPGGAFLYTNKDAVTLGIVVYLEHG
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECC
NKLDVPVYDLIEEFRLHPFISRLLKGGQLLEYSAHLTPIAGLKAMPPRLYGNGYLVVGDA
CCCCCCHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCCEEEEECH
AGFLLHLGVLIRGVDFAMESGRLAAEAVIKAHDQGKYDEEALSVYQQLLNESFVLREFNT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHH
FKNAHKVLNNPRLYSDYVMLANAFMSRYFDVDGTPRRIWDTFMKAKGNLTLVDLTKDALS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHH
LVMNL
HHHCC
>Mature Secondary Structure 
SQRFDVIVVGAGPGGLTAAQRLASGGFKVLVVERGRRPGSKNVYGGRIYAHVLDKLYPE
CCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
YVKEAPVERWVRKERLTMLTKDSGVTVEFETKATEHKSFTAYLSSFTEWLDRKAEAAGAL
HHHHCHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
VVTETPVDSLITKDGKVIGIRSGSDEVYGDVVIVAEGINRLVLESSGLAPKLQPSVVGLG
EEECCCHHHHHCCCCCEEEEECCCCCHHCCEEEEECCCCEEEEECCCCCCCCCCHHCCCC
VKEVIKLSRGEINERFNLDEDEGLAWALAGYPTHYVPGGAFLYTNKDAVTLGIVVYLEHG
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECC
NKLDVPVYDLIEEFRLHPFISRLLKGGQLLEYSAHLTPIAGLKAMPPRLYGNGYLVVGDA
CCCCCCHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCCEEEEECH
AGFLLHLGVLIRGVDFAMESGRLAAEAVIKAHDQGKYDEEALSVYQQLLNESFVLREFNT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHH
FKNAHKVLNNPRLYSDYVMLANAFMSRYFDVDGTPRRIWDTFMKAKGNLTLVDLTKDALS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHH
LVMNL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]