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The map label for this gene is rps17e [H]

Identifier: 159041043

GI number: 159041043

Start: 499120

End: 499437

Strand: Reverse

Name: rps17e [H]

Synonym: Cmaq_0460

Alternate gene names: 159041043

Gene position: 499437-499120 (Counterclockwise)

Preceding gene: 159041044

Following gene: 159041042

Centisome position: 24.04

GC content: 43.71

Gene sequence:

>318_bases
GTGTTTAGAATTAATCCTCATGCTAAGAAACGCTTAAAACCACCGACTCAACATCGTTGCTTAATGGGTAAGGTTAGGCC
AGCTTACATTAAGAGGGTTGGTAGAATGCTTATGGAGCAGTACCCTGATAGGTTTACTGAGGACTTTGAGCATAATAAGC
AGGTGGTGGGTCAATTAGTTGAGGGGGTTTCGAAGAAGGTTAGGAATAGGATTGCAGGCTACATAACATCACAGGTTAAG
CGCATTAAGACTGCTGGCGAGGAGGAAGAGGTTGAGGAAAGTGAAAGTGTAAAAACCAGTAGTGAGGGTGGTTCCTAA

Upstream 100 bases:

>100_bases
AGTGGAGATACCTTAGCGCATTCAGTAAATTAGGAATCACGCAGGCTTACTTACCACCTAAGGGTTATTAGGTTAGGTGG
AATGATTTTGAGGTTAAGGG

Downstream 100 bases:

>100_bases
TGGTTCTGCAGAAGGGTGACTACATACTTCTGGACTACACCATGCTTACGAAGGAGGATGGTAAGGTTATTGAGACCACT
ATTGAGGAGAAGGCTAAGGA

Product: 30S ribosomal protein S17E-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MFRINPHAKKRLKPPTQHRCLMGKVRPAYIKRVGRMLMEQYPDRFTEDFEHNKQVVGQLVEGVSKKVRNRIAGYITSQVK
RIKTAGEEEEVEESESVKTSSEGGS

Sequences:

>Translated_105_residues
MFRINPHAKKRLKPPTQHRCLMGKVRPAYIKRVGRMLMEQYPDRFTEDFEHNKQVVGQLVEGVSKKVRNRIAGYITSQVK
RIKTAGEEEEVEESESVKTSSEGGS
>Mature_105_residues
MFRINPHAKKRLKPPTQHRCLMGKVRPAYIKRVGRMLMEQYPDRFTEDFEHNKQVVGQLVEGVSKKVRNRIAGYITSQVK
RIKTAGEEEEVEESESVKTSSEGGS

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001210
- InterPro:   IPR018273 [H]

Pfam domain/function: PF00833 Ribosomal_S17e [H]

EC number: NA

Molecular weight: Translated: 12074; Mature: 12074

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRINPHAKKRLKPPTQHRCLMGKVRPAYIKRVGRMLMEQYPDRFTEDFEHNKQVVGQLV
CCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EGVSKKVRNRIAGYITSQVKRIKTAGEEEEVEESESVKTSSEGGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFRINPHAKKRLKPPTQHRCLMGKVRPAYIKRVGRMLMEQYPDRFTEDFEHNKQVVGQLV
CCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EGVSKKVRNRIAGYITSQVKRIKTAGEEEEVEESESVKTSSEGGS
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA