| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041044
Identifier: 159041044
GI number: 159041044
Start: 499522
End: 499956
Strand: Reverse
Name: 159041044
Synonym: Cmaq_0461
Alternate gene names: NA
Gene position: 499956-499522 (Counterclockwise)
Preceding gene: 159041046
Following gene: 159041043
Centisome position: 24.06
GC content: 41.84
Gene sequence:
>435_bases ATGGATGCTTTAATGAGGTTTATGAGGATAACTATTAAAGGGGGGTTACGCATATTTACAGTGATGGAGGATATAAGGAA GTGCATACTGCTTGACTCAATTAGGATGCTTGATGGATCATGCAGCATAGATAAGTTAGCCTTATTAATGTACATAGTGG ATAAGCAAAGCGGCTTCTCAGTATTCACCTGGAGTATTGAGGATTACTTCCCGGTTAGTCAAGACTTCCTGGATACTGTT GAGGAGTTGAGGAGGGGTGGCTACGTGGTTGTTGATAATGGTAAAGTTAGCGTAACTGATGCAGTATTCGACTCCTCAGC CTGCAGTAATCACTGGCTCTACGGGAGGTTAATAAGCTACGTCAGTGATGTAATAGGTAAGTACAAGGGTAAGGATGTTA ATGAGCTTTTAAGCGAAGTAGTGGAGATACCTTAG
Upstream 100 bases:
>100_bases CCCTAATTAAAGAGTATAATTCGTCGATTGTTGACATGCCTGTCTTCAATAATTAAGCCCTTTATAAACTTAACTACGTG TTAACAAGGCTTTCAACCAC
Downstream 100 bases:
>100_bases CGCATTCAGTAAATTAGGAATCACGCAGGCTTACTTACCACCTAAGGGTTATTAGGTTAGGTGGAATGATTTTGAGGTTA AGGGGTGTTTAGAATTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDALMRFMRITIKGGLRIFTVMEDIRKCILLDSIRMLDGSCSIDKLALLMYIVDKQSGFSVFTWSIEDYFPVSQDFLDTV EELRRGGYVVVDNGKVSVTDAVFDSSACSNHWLYGRLISYVSDVIGKYKGKDVNELLSEVVEIP
Sequences:
>Translated_144_residues MDALMRFMRITIKGGLRIFTVMEDIRKCILLDSIRMLDGSCSIDKLALLMYIVDKQSGFSVFTWSIEDYFPVSQDFLDTV EELRRGGYVVVDNGKVSVTDAVFDSSACSNHWLYGRLISYVSDVIGKYKGKDVNELLSEVVEIP >Mature_144_residues MDALMRFMRITIKGGLRIFTVMEDIRKCILLDSIRMLDGSCSIDKLALLMYIVDKQSGFSVFTWSIEDYFPVSQDFLDTV EELRRGGYVVVDNGKVSVTDAVFDSSACSNHWLYGRLISYVSDVIGKYKGKDVNELLSEVVEIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16324; Mature: 16324
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALMRFMRITIKGGLRIFTVMEDIRKCILLDSIRMLDGSCSIDKLALLMYIVDKQSGFS CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE VFTWSIEDYFPVSQDFLDTVEELRRGGYVVVDNGKVSVTDAVFDSSACSNHWLYGRLISY EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEHHHHHCCCCCCCCHHHHHHHHH VSDVIGKYKGKDVNELLSEVVEIP HHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MDALMRFMRITIKGGLRIFTVMEDIRKCILLDSIRMLDGSCSIDKLALLMYIVDKQSGFS CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE VFTWSIEDYFPVSQDFLDTVEELRRGGYVVVDNGKVSVTDAVFDSSACSNHWLYGRLISY EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEHHHHHCCCCCCCCHHHHHHHHH VSDVIGKYKGKDVNELLSEVVEIP HHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA