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The map label for this gene is fixB [H]

Identifier: 159041022

GI number: 159041022

Start: 473882

End: 474790

Strand: Reverse

Name: fixB [H]

Synonym: Cmaq_0439

Alternate gene names: 159041022

Gene position: 474790-473882 (Counterclockwise)

Preceding gene: 159041023

Following gene: 159041021

Centisome position: 22.85

GC content: 43.45

Gene sequence:

>909_bases
ATGATCCTGGTGATCCTTGATCAAGAGACATTAAGCATCCTAGGCCTAGCCCAGGAAATGATGGAGGCCACAGGCTTAAC
GATGAATGCAATCCTCCTAGGTAGCGGTGAAGGAATTAACCTAAGTAATTATGGTGTGTCAAAGGTATACATTATTAATA
ACAGTAGGTTAATTGACCCAGCTCCATTAGCCAGATTCATTTCAAGTAATTTTAAGGAAGCCAAATACATAGTAATGCCG
GATAATAAGGCATATAGGTCACTTAGCGGTTACTTAAGTGGATTAATGAATACACCAGTTGTAATTAACCCCACTGACGT
TAAGCCACCTTCATTCAGAGTTAATGCACTTGGTAATAGGGCTATTGAGGAATTGGAGACTCAACCACCGGTAATAATCG
TTGCTCAAGCTACTAGGTTTAAGCCTAAGCAGTATGCCCAAGGTAATGTAGTCACTGTCACTAATGTAAGCATTGAGCCT
GGTTCATTAACGCTAATTAATGTTGAAGGTAAGTCAACAAGTAACGTTAGGATTGAGGAGGCTGATGTAATAGTGACTGT
GGGTAGGGGGTTTAGGAGTAAAGATGACTTAAGGCTTGCCATTGAGTTAGCTGAGGCCTTAGGTGCTCAACTGGGTTGCT
CAAGGCCATTGGCGGCTGACCTTAAGTGGCTGAGTGAGGATCATTGGGTTGGGTTAAGTGGACATAAGGTTAAGCCAAGA
TTATACATAGCGGTTGGGGTAAGTGGGCAACCACAGCACTTAGCAGGCATGATGGAGTCAGGTATAGTGGTTGTGATTAA
TAATGATAGGAACGCCCCCTTCTTCAAGTACTGCGACTACGGTGTTGTCGAGGACTTATACAGGTTCCTCCCAGTCTTAA
CAAGGAAGATTAGGGAGAGGAGGCGTTGA

Upstream 100 bases:

>100_bases
TAAGTAGGAGAGGTATTATTATTGATTCAGGCAGTGTTGAGGAGAAGGCTGATAAACTCATTGAATACTTAATTAAGGAT
AATGCTTTGAGGTGAGGGTA

Downstream 100 bases:

>100_bases
CACTGCCTCAACTGCATCGTTTGGGAAATCTTTATTAAAATGCGCCGTAGACCGTCCACATGGTTAAGGCAGGGGGAGGG
AAGAGAGGTAGTGCCGCTAA

Product: electron transfer flavoprotein subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MILVILDQETLSILGLAQEMMEATGLTMNAILLGSGEGINLSNYGVSKVYIINNSRLIDPAPLARFISSNFKEAKYIVMP
DNKAYRSLSGYLSGLMNTPVVINPTDVKPPSFRVNALGNRAIEELETQPPVIIVAQATRFKPKQYAQGNVVTVTNVSIEP
GSLTLINVEGKSTSNVRIEEADVIVTVGRGFRSKDDLRLAIELAEALGAQLGCSRPLAADLKWLSEDHWVGLSGHKVKPR
LYIAVGVSGQPQHLAGMMESGIVVVINNDRNAPFFKYCDYGVVEDLYRFLPVLTRKIRERRR

Sequences:

>Translated_302_residues
MILVILDQETLSILGLAQEMMEATGLTMNAILLGSGEGINLSNYGVSKVYIINNSRLIDPAPLARFISSNFKEAKYIVMP
DNKAYRSLSGYLSGLMNTPVVINPTDVKPPSFRVNALGNRAIEELETQPPVIIVAQATRFKPKQYAQGNVVTVTNVSIEP
GSLTLINVEGKSTSNVRIEEADVIVTVGRGFRSKDDLRLAIELAEALGAQLGCSRPLAADLKWLSEDHWVGLSGHKVKPR
LYIAVGVSGQPQHLAGMMESGIVVVINNDRNAPFFKYCDYGVVEDLYRFLPVLTRKIRERRR
>Mature_302_residues
MILVILDQETLSILGLAQEMMEATGLTMNAILLGSGEGINLSNYGVSKVYIINNSRLIDPAPLARFISSNFKEAKYIVMP
DNKAYRSLSGYLSGLMNTPVVINPTDVKPPSFRVNALGNRAIEELETQPPVIIVAQATRFKPKQYAQGNVVTVTNVSIEP
GSLTLINVEGKSTSNVRIEEADVIVTVGRGFRSKDDLRLAIELAEALGAQLGCSRPLAADLKWLSEDHWVGLSGHKVKPR
LYIAVGVSGQPQHLAGMMESGIVVVINNDRNAPFFKYCDYGVVEDLYRFLPVLTRKIRERRR

Specific function: Required for anaerobic carnitine reduction. May bring reductant to CaiA [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=120, Percent_Identity=44.1666666666667, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI189181759, Length=120, Percent_Identity=44.1666666666667, Blast_Score=107, Evalue=9e-24,
Organism=Escherichia coli, GI1786226, Length=133, Percent_Identity=43.609022556391, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1787990, Length=128, Percent_Identity=42.1875, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI87082157, Length=233, Percent_Identity=30.0429184549356, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506929, Length=186, Percent_Identity=34.9462365591398, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6325261, Length=271, Percent_Identity=31.7343173431734, Blast_Score=102, Evalue=8e-23,
Organism=Drosophila melanogaster, GI17136898, Length=117, Percent_Identity=47.008547008547, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24652801, Length=117, Percent_Identity=47.008547008547, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 33213; Mature: 33213

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVILDQETLSILGLAQEMMEATGLTMNAILLGSGEGINLSNYGVSKVYIINNSRLIDP
CEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCCEEEEEEECCEECCH
APLARFISSNFKEAKYIVMPDNKAYRSLSGYLSGLMNTPVVINPTDVKPPSFRVNALGNR
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCHH
AIEELETQPPVIIVAQATRFKPKQYAQGNVVTVTNVSIEPGSLTLINVEGKSTSNVRIEE
HHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEE
ADVIVTVGRGFRSKDDLRLAIELAEALGAQLGCSRPLAADLKWLSEDHWVGLSGHKVKPR
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCCCEECCE
LYIAVGVSGQPQHLAGMMESGIVVVINNDRNAPFFKYCDYGVVEDLYRFLPVLTRKIRER
EEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
RR
CC
>Mature Secondary Structure
MILVILDQETLSILGLAQEMMEATGLTMNAILLGSGEGINLSNYGVSKVYIINNSRLIDP
CEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCCEEEEEEECCEECCH
APLARFISSNFKEAKYIVMPDNKAYRSLSGYLSGLMNTPVVINPTDVKPPSFRVNALGNR
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCHH
AIEELETQPPVIIVAQATRFKPKQYAQGNVVTVTNVSIEPGSLTLINVEGKSTSNVRIEE
HHHHHCCCCCEEEEECCCCCCCHHHCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEE
ADVIVTVGRGFRSKDDLRLAIELAEALGAQLGCSRPLAADLKWLSEDHWVGLSGHKVKPR
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEECCCCCEECCE
LYIAVGVSGQPQHLAGMMESGIVVVINNDRNAPFFKYCDYGVVEDLYRFLPVLTRKIRER
EEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA