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The map label for this gene is 159040880

Identifier: 159040880

GI number: 159040880

Start: 332028

End: 332510

Strand: Reverse

Name: 159040880

Synonym: Cmaq_0294

Alternate gene names: NA

Gene position: 332510-332028 (Counterclockwise)

Preceding gene: 159040881

Following gene: 159040879

Centisome position: 16.0

GC content: 39.96

Gene sequence:

>483_bases
ATGTCATTAGTACTCTCGCCTCAATTAGTTAATTTATTAAGGGAGTTAGCTGGTGGTAGGGATGTTGAGGCCTTCATTAT
TGATTTAATTGCTGAGAGGCTTGATCCACCTCATAGGGTTAAGCTTTATCTGAGCCTACATGAGGATTACCTTAAATCAG
CTGAGGAGCTATATGCCAAGGGTGATTTGACTCAGGCTGGTGAAAAGTACTGGGGTGCTGTTACTGCTTTGCTTAATGCT
ATAGCTGAGTCAAGGAGCTGGGAGCATTATAGCCATAGGGATTATGATATTATTATTGAAGAATTATATAAGGAGACTAA
TGATAAGTCAATTTTAGTGAACTTCAGTATGGCTGAAAGACTACACGCAAACTTTTACCATAACTTCATGAGTAAGGAGG
GGTTTGAGGCGCATAGGGAGGCTGTTCTTAACCTAGTGAATAGGTTAAGGGGAATAGTAGGCGTTATGGAATCGCATAAT
TAA

Upstream 100 bases:

>100_bases
GCATTAATTATCCTTAGGCTAATTCTATGGGATGGAGGAAGTGTCTGCTTAAATTGATTTAAATAATGTTTTTAAGTAGG
TACACAGTGATTTACCAGGC

Downstream 100 bases:

>100_bases
ATATGCGGGTAATGGTTTTTCCATTATGTATCAACTAACCCCATGTTCATAAACCCTTATCCTGACCCTTAGTTGATTAG
CCATCAACTTAGCTTCACCA

Product: PaREP1 protein

Products: NA

Alternate protein names: PaREP1 Domain-Containing Protein; PaREP1/PaREP8 Domain-Contain Protein; PaREP8 Domain-Containing Protein; PaREP1 Protein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSLVLSPQLVNLLRELAGGRDVEAFIIDLIAERLDPPHRVKLYLSLHEDYLKSAEELYAKGDLTQAGEKYWGAVTALLNA
IAESRSWEHYSHRDYDIIIEELYKETNDKSILVNFSMAERLHANFYHNFMSKEGFEAHREAVLNLVNRLRGIVGVMESHN

Sequences:

>Translated_160_residues
MSLVLSPQLVNLLRELAGGRDVEAFIIDLIAERLDPPHRVKLYLSLHEDYLKSAEELYAKGDLTQAGEKYWGAVTALLNA
IAESRSWEHYSHRDYDIIIEELYKETNDKSILVNFSMAERLHANFYHNFMSKEGFEAHREAVLNLVNRLRGIVGVMESHN
>Mature_159_residues
SLVLSPQLVNLLRELAGGRDVEAFIIDLIAERLDPPHRVKLYLSLHEDYLKSAEELYAKGDLTQAGEKYWGAVTALLNAI
AESRSWEHYSHRDYDIIIEELYKETNDKSILVNFSMAERLHANFYHNFMSKEGFEAHREAVLNLVNRLRGIVGVMESHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18415; Mature: 18284

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVLSPQLVNLLRELAGGRDVEAFIIDLIAERLDPPHRVKLYLSLHEDYLKSAEELYAK
CCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHC
GDLTQAGEKYWGAVTALLNAIAESRSWEHYSHRDYDIIIEELYKETNDKSILVNFSMAER
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
LHANFYHNFMSKEGFEAHREAVLNLVNRLRGIVGVMESHN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLVLSPQLVNLLRELAGGRDVEAFIIDLIAERLDPPHRVKLYLSLHEDYLKSAEELYAK
CCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHC
GDLTQAGEKYWGAVTALLNAIAESRSWEHYSHRDYDIIIEELYKETNDKSILVNFSMAER
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHH
LHANFYHNFMSKEGFEAHREAVLNLVNRLRGIVGVMESHN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA