The gene/protein map for NC_009954 is currently unavailable.
Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159040800

Identifier: 159040800

GI number: 159040800

Start: 249899

End: 250165

Strand: Reverse

Name: 159040800

Synonym: Cmaq_0213

Alternate gene names: NA

Gene position: 250165-249899 (Counterclockwise)

Preceding gene: 159040802

Following gene: 159040799

Centisome position: 12.04

GC content: 35.96

Gene sequence:

>267_bases
GTGGAAGGGGATAACCACTTATATTATCCGCTACCTAAAAATCGCTCAATTAGAATTAATGGTATGGAAGCAATTACATT
GATATATGATGAGTCAACAATGAACCTGGTAAAGGAATTGTTAGGTAAGGGCATTACTAACGTTAAGTTAATTAAGGCTT
ACGGTGATGAATTACCCACACCCATATTGATAACCGGTAACATAGTGTTAACTGGGTTACAGGCTATACAATATATTAGG
GATATTGGAGTAATTAGGCGTAGTTGA

Upstream 100 bases:

>100_bases
GGCCTTTATAAACAATACTTCGCTGTTAATCTCAGTATTAAGACTTAAACTTTAAGTGGTGTATAATGGGGTTTAAATTA
AAGTTCCCTAATAGGGTAGT

Downstream 100 bases:

>100_bases
ATCATTGCATAATGAGGGTTTTACATTAAAGGCGAATTAAATATGTGAAACAATGTTTATTAAACATATTATTAATACTA
ATTTAACGCTAATATTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEGDNHLYYPLPKNRSIRINGMEAITLIYDESTMNLVKELLGKGITNVKLIKAYGDELPTPILITGNIVLTGLQAIQYIR
DIGVIRRS

Sequences:

>Translated_88_residues
MEGDNHLYYPLPKNRSIRINGMEAITLIYDESTMNLVKELLGKGITNVKLIKAYGDELPTPILITGNIVLTGLQAIQYIR
DIGVIRRS
>Mature_88_residues
MEGDNHLYYPLPKNRSIRINGMEAITLIYDESTMNLVKELLGKGITNVKLIKAYGDELPTPILITGNIVLTGLQAIQYIR
DIGVIRRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9872; Mature: 9872

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGDNHLYYPLPKNRSIRINGMEAITLIYDESTMNLVKELLGKGITNVKLIKAYGDELPT
CCCCCCEEEECCCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PILITGNIVLTGLQAIQYIRDIGVIRRS
CEEEECCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEGDNHLYYPLPKNRSIRINGMEAITLIYDESTMNLVKELLGKGITNVKLIKAYGDELPT
CCCCCCEEEECCCCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PILITGNIVLTGLQAIQYIRDIGVIRRS
CEEEECCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA