Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159040799

Identifier: 159040799

GI number: 159040799

Start: 249539

End: 249775

Strand: Reverse

Name: 159040799

Synonym: Cmaq_0212

Alternate gene names: NA

Gene position: 249775-249539 (Counterclockwise)

Preceding gene: 159040800

Following gene: 159040795

Centisome position: 12.02

GC content: 37.55

Gene sequence:

>237_bases
ATGGCGTTTGAGGTTTTCCTCCTAATACAGACCAGGGTTGGGAAGGTATTTGAGGTGTCAGAGAAGATAAAATCAATTAA
TTGGATTAAGGTGGCTTACTCTGTTACTGGGCCATATGATATAATAGCCTTAGCGGAGGTTGATAGGGTTGATGACTTAG
AGAGCTTAATAAAAATGATTCATTCAATTGATGGTGTTGAAAGAACGTTAACAGCAATGGTGATTAGAAAGCATTAA

Upstream 100 bases:

>100_bases
CATTAAAGGCGAATTAAATATGTGAAACAATGTTTATTAAACATATTATTAATACTAATTTAACGCTAATATTTATAAAT
TAGTGAACGTAAGGTTAACT

Downstream 100 bases:

>100_bases
TATAGAACTATAAATAATACATGTAAGTATTATTAAGATTCATTATAAAAATGCATTAGAATCTGCAGCATATGTTCACG
TAAGATTTTTAATACAGTTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH

Sequences:

>Translated_78_residues
MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH
>Mature_77_residues
AFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8892; Mature: 8760

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMI
CCEEEEEEEEHHCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH
HSIDGVERTLTAMVIRKH
HHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMI
CEEEEEEEEHHCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH
HSIDGVERTLTAMVIRKH
HHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA