| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040799
Identifier: 159040799
GI number: 159040799
Start: 249539
End: 249775
Strand: Reverse
Name: 159040799
Synonym: Cmaq_0212
Alternate gene names: NA
Gene position: 249775-249539 (Counterclockwise)
Preceding gene: 159040800
Following gene: 159040795
Centisome position: 12.02
GC content: 37.55
Gene sequence:
>237_bases ATGGCGTTTGAGGTTTTCCTCCTAATACAGACCAGGGTTGGGAAGGTATTTGAGGTGTCAGAGAAGATAAAATCAATTAA TTGGATTAAGGTGGCTTACTCTGTTACTGGGCCATATGATATAATAGCCTTAGCGGAGGTTGATAGGGTTGATGACTTAG AGAGCTTAATAAAAATGATTCATTCAATTGATGGTGTTGAAAGAACGTTAACAGCAATGGTGATTAGAAAGCATTAA
Upstream 100 bases:
>100_bases CATTAAAGGCGAATTAAATATGTGAAACAATGTTTATTAAACATATTATTAATACTAATTTAACGCTAATATTTATAAAT TAGTGAACGTAAGGTTAACT
Downstream 100 bases:
>100_bases TATAGAACTATAAATAATACATGTAAGTATTATTAAGATTCATTATAAAAATGCATTAGAATCTGCAGCATATGTTCACG TAAGATTTTTAATACAGTTC
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH
Sequences:
>Translated_78_residues MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH >Mature_77_residues AFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMIHSIDGVERTLTAMVIRKH
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8892; Mature: 8760
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMI CCEEEEEEEEHHCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH HSIDGVERTLTAMVIRKH HHCCCHHHHHHHHHHCCC >Mature Secondary Structure AFEVFLLIQTRVGKVFEVSEKIKSINWIKVAYSVTGPYDIIALAEVDRVDDLESLIKMI CEEEEEEEEHHCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHH HSIDGVERTLTAMVIRKH HHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA