Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159040792

Identifier: 159040792

GI number: 159040792

Start: 242132

End: 243634

Strand: Reverse

Name: 159040792

Synonym: Cmaq_0205

Alternate gene names: NA

Gene position: 243634-242132 (Counterclockwise)

Preceding gene: 159040794

Following gene: 159040790

Centisome position: 11.73

GC content: 44.58

Gene sequence:

>1503_bases
GTGAGCGATAAGGGTTTGTTTGTTAGGGGTTCTACTGGTTTGGTTAGGGAGGCTGGTTTTGTTGATGCTGTTAGTGTTAA
TGTTGCTAATATGTCTGTTGGTGCTGCTTTGGGTACTGTTGGTTTTACACTAGCCTCCTTACCCTCAGTGTCTGGTGTTA
ACCTAGTTGCAGCATCAATAATAGCCTTCACACTATCAATACCACAAATAATAACATACACAACACTAACAAAACACATA
CCAAGAACAGGAGGAGACTACGTATGGGTTAGTAGGCTACTTGGCCCAAGGTTCACGTGGCTTGTAGTAGGCCTTGTCGT
AGGCTTCATAATAGAGTCACTGGCCTACTATGCCTTAATAGCCATAGCTGGGGTGGGGCAGTTGGGTACAATGTTATCAA
CCCTAGGCATTAACATCAGCTTCACCCCCCTTGAGGTTATTGGAATCGGCATCCTTTACTTCGCCATAGTAGTCTTCGTG
AACATAATGGGTACTAAGTATGGTATTAGGTTAATGACTGTGTTAACCATTGCATCAATAGTCACACTCTTCTTAGCCTT
AGCGGTACTATACGTAGTACCTAAATCAGTGGTTATAAGTCGAGTCAGCTCACTCTTACCAAGTGGTGTAACGTATAGTA
AGGTTGCTTCACAGTACACTGGCCCATACTTCGCACTAGGCCCAACAATAATGATGCTACCCTTCTTCGCAATATACATA
TACCCATGGCTTCAGGCAGCACCTGCAATAGCATCGGAGATAAAGAGTAGGCGCGCCATTAACTGGAATCTACCGACATC
AGCAGTCTTATCAATGATCATGGTGACCCTCGGCTTCGCAGCAATGTATTACTCAATGGGGTTTAGGTTCTCCACAATGG
CTATGGCTAATGGTTACGTTAACTTCTGGTCAGCGGCAATGGTTGCCTCAGGTAATGTGGTGTTGGCTTGGATAATAGGG
ATTGGGTCAGTGTTATGGTACTTGGCGGTGTTAGCCTATGGAGCCATAGTGATCGTACGCTACTTATTCGCATTATCCTT
TGATAGGATACTACCGGAGTTCTTCTCATACGTAAGTCCACGTCTAAGGAGCCCAGTCTATGCGCATTTATTCGACTTAG
TCATAACAGCAGCATTAATAGCCTCAGCTGAAGCATTATACAGCACCTTCTCAAGCCTATACGGTGCAGTGGTGGAGGCA
TTAATATACTTCGCCCTAGTCGGCGTAGCCGCGGCGGTTGCGGCTATTCTTAATAAGGTTAAGTTAAGTAGAGGTGTTAG
GGTAACCTTAGCCGTGGCAAGTATACTGATGGTTGGGGTTATGGGTTACATATCTTATCAATTCCTAGAGTACCCAAGCA
TCTGGGGTGGTAATCCATTAGCATACGGTGTTGAAATAGGAGCTGTGTTGGTGGGGATAGCTATATACTTCATAGCAAGG
CACATTAACTTAAGAAGGGGACTAGATATATCACTGGTGTTCATGGAAATACCGCCTGAATAA

Upstream 100 bases:

>100_bases
GTATTTAACAATTAGTTTAACATATAAATTTAATTAAGTAATTAAAGGAATCATTTAATTAAGGGAAATGGTTTATAAAT
TGGTTTAATTAAGGAGTTGC

Downstream 100 bases:

>100_bases
TACTTTATGTGAAAATAATTTAAATAAACCTTTATTGTTTAAGCCAACTGATTAAATCCATCCTCTTAGTTTCATTGCCT
TCTCCACTCTCTCTATGGCT

Product: amino acid transporter

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSDKGLFVRGSTGLVREAGFVDAVSVNVANMSVGAALGTVGFTLASLPSVSGVNLVAASIIAFTLSIPQIITYTTLTKHI
PRTGGDYVWVSRLLGPRFTWLVVGLVVGFIIESLAYYALIAIAGVGQLGTMLSTLGINISFTPLEVIGIGILYFAIVVFV
NIMGTKYGIRLMTVLTIASIVTLFLALAVLYVVPKSVVISRVSSLLPSGVTYSKVASQYTGPYFALGPTIMMLPFFAIYI
YPWLQAAPAIASEIKSRRAINWNLPTSAVLSMIMVTLGFAAMYYSMGFRFSTMAMANGYVNFWSAAMVASGNVVLAWIIG
IGSVLWYLAVLAYGAIVIVRYLFALSFDRILPEFFSYVSPRLRSPVYAHLFDLVITAALIASAEALYSTFSSLYGAVVEA
LIYFALVGVAAAVAAILNKVKLSRGVRVTLAVASILMVGVMGYISYQFLEYPSIWGGNPLAYGVEIGAVLVGIAIYFIAR
HINLRRGLDISLVFMEIPPE

Sequences:

>Translated_500_residues
MSDKGLFVRGSTGLVREAGFVDAVSVNVANMSVGAALGTVGFTLASLPSVSGVNLVAASIIAFTLSIPQIITYTTLTKHI
PRTGGDYVWVSRLLGPRFTWLVVGLVVGFIIESLAYYALIAIAGVGQLGTMLSTLGINISFTPLEVIGIGILYFAIVVFV
NIMGTKYGIRLMTVLTIASIVTLFLALAVLYVVPKSVVISRVSSLLPSGVTYSKVASQYTGPYFALGPTIMMLPFFAIYI
YPWLQAAPAIASEIKSRRAINWNLPTSAVLSMIMVTLGFAAMYYSMGFRFSTMAMANGYVNFWSAAMVASGNVVLAWIIG
IGSVLWYLAVLAYGAIVIVRYLFALSFDRILPEFFSYVSPRLRSPVYAHLFDLVITAALIASAEALYSTFSSLYGAVVEA
LIYFALVGVAAAVAAILNKVKLSRGVRVTLAVASILMVGVMGYISYQFLEYPSIWGGNPLAYGVEIGAVLVGIAIYFIAR
HINLRRGLDISLVFMEIPPE
>Mature_499_residues
SDKGLFVRGSTGLVREAGFVDAVSVNVANMSVGAALGTVGFTLASLPSVSGVNLVAASIIAFTLSIPQIITYTTLTKHIP
RTGGDYVWVSRLLGPRFTWLVVGLVVGFIIESLAYYALIAIAGVGQLGTMLSTLGINISFTPLEVIGIGILYFAIVVFVN
IMGTKYGIRLMTVLTIASIVTLFLALAVLYVVPKSVVISRVSSLLPSGVTYSKVASQYTGPYFALGPTIMMLPFFAIYIY
PWLQAAPAIASEIKSRRAINWNLPTSAVLSMIMVTLGFAAMYYSMGFRFSTMAMANGYVNFWSAAMVASGNVVLAWIIGI
GSVLWYLAVLAYGAIVIVRYLFALSFDRILPEFFSYVSPRLRSPVYAHLFDLVITAALIASAEALYSTFSSLYGAVVEAL
IYFALVGVAAAVAAILNKVKLSRGVRVTLAVASILMVGVMGYISYQFLEYPSIWGGNPLAYGVEIGAVLVGIAIYFIARH
INLRRGLDISLVFMEIPPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53698; Mature: 53566

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKGLFVRGSTGLVREAGFVDAVSVNVANMSVGAALGTVGFTLASLPSVSGVNLVAASI
CCCCCEEEECCCCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IAFTLSIPQIITYTTLTKHIPRTGGDYVWVSRLLGPRFTWLVVGLVVGFIIESLAYYALI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AIAGVGQLGTMLSTLGINISFTPLEVIGIGILYFAIVVFVNIMGTKYGIRLMTVLTIASI
HHHCCHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VTLFLALAVLYVVPKSVVISRVSSLLPSGVTYSKVASQYTGPYFALGPTIMMLPFFAIYI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YPWLQAAPAIASEIKSRRAINWNLPTSAVLSMIMVTLGFAAMYYSMGFRFSTMAMANGYV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHH
NFWSAAMVASGNVVLAWIIGIGSVLWYLAVLAYGAIVIVRYLFALSFDRILPEFFSYVSP
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
RLRSPVYAHLFDLVITAALIASAEALYSTFSSLYGAVVEALIYFALVGVAAAVAAILNKV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSRGVRVTLAVASILMVGVMGYISYQFLEYPSIWGGNPLAYGVEIGAVLVGIAIYFIAR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HINLRRGLDISLVFMEIPPE
HHHHCCCCCEEEEEEECCCC
>Mature Secondary Structure 
SDKGLFVRGSTGLVREAGFVDAVSVNVANMSVGAALGTVGFTLASLPSVSGVNLVAASI
CCCCEEEECCCCCHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH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HHHHCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA