| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is eriC [C]
Identifier: 159040763
GI number: 159040763
Start: 209596
End: 211356
Strand: Reverse
Name: eriC [C]
Synonym: Cmaq_0176
Alternate gene names: 159040763
Gene position: 211356-209596 (Counterclockwise)
Preceding gene: 159040768
Following gene: 159040762
Centisome position: 10.17
GC content: 45.49
Gene sequence:
>1761_bases ATGAACATTAGTGAGTTGCCGTATTATGTCAAGTGGTTTATTTTAGGAATCGTGATTGGTGTGGTTGCTGGTTTATCGGC ATTAGCCTTCTACTTCACTTTAAAGTTCATGGAGTACTTATTCATGGTTAGGTTAATTGCTTTTAAACCACCTCTACCCA TAGGGGAGGGTGGTTCATTAAACTACGTACTTCATGCAGGTAGGCTTTGGTTAATACCGGTGTCCACTGCCTTAGGTGGG TTACTTTCAGGTTTAATAGTGTATACCTGGGCTCCTGAGGCTGAGGGTCATGGGACTGATGCGGCGATTAATGCCTTTCA TAGGCTTCAAGGCAGGATTAGAAGGAGAATACCGCCTATTAAACTCATAGCCTCAGCCATAACGATTGGGTCAGGGGGAA GTGCCGGTAGGGAGGGGCCCACGGCTCAATTAAGCGCTGGTATTGGGTCGTTTATAGCCGATTTATTAGGCTTATCTGCT GAGGATAGGAGGATTGCTGTTGCTGTTGGTATTGGTGCTGGTATTGGTTCAATATTTAAGGCACCCATGGGTGGAGCAAT ATTAGCGGCTGAGGTGCTTTATAAGAGGGATATGGAGACTGAGGTCTTATTCCCGGCCCTAGTGGCCTCAGTGGTGGGTT ACTCAATATTTAGCTCCATTGTTGGCTTCACCCCAATATTCGGGTACTACACCGGTGTCTTCAATCCATTAAGGTTACCA TTATACGCCGTTCTCGGTATAGTGGATGGATTAGTAGCGGTACTTTACGTGAAGACCTTCTACTTCATTCACGACTCCTT CAAGAGGTGGAGGATTAGCAACTACGTGAAACCTGTAATTGGTGGCCTTGCCACTGGTTTAATAGGCCTACTGGTGCCTG AAATATTAGGCACTGGTTATGGTTGGGTTAACTTAGCTGAGTTCAATAATGTTAATGCATTTGCGTCACCAGTACTAATA CCACCGCTTATGATTCTAATACTGCTACCATTCCTCAAGATTATTGCAACATCATTCACAGTAGGTTCAGGTGGTAGTGG TGGTGTCTTTGCGCCAGGCATAGTGATAGGGGCTTTCACTGGTTTTGATGCTTGGCTTCTTTTCCACTACCTGACACCAG GCTTAACCCCTAATCCTGCGCCATTTGTAATAGTGAGTATGCTTGCGCTCTTCGGGGCTTCTGCTAAAGCCCCCTTGGCG GTAATGTTCATGGTTATTGAAATGACGGGTAGTTATCAATTATTGCCTGCAGCCATGATAGCCGTGGCAATAGCCTACAT AGTATCAGGTGACTATACGATATATAGGGCCCAAGTCCCAACTAGGAGGGATTCCCCAGCCCATGCTAATGAATACAAGG TACCACTCATCATGGAGCTTAAGGTTAAGGATTGTAGAATAATTAAGGGACCTGTGGTGAGTCCAAGTGATGATGCTGGT AAAGCCTTAAACACAATGCTTAGACTCAGGTACACGGCGTTGCCTGTTGTTGATGATGGGAGGTTCATAGGCTTGATCAG TATCTATAACATGAATGGTGGCAGGGGGAAGGTTAGTGACTACATTATTAGGGATACCCAGTACGTGACCCCTGAGTCCA CGCTTTACGATGCATTAACAGTTATGAGTAAACTGGGCACCACCTGGGTACCAGTGGTGAGTAACGGTGAGTTCCTGGGG ATACTAACCATGGAGAACATGAATAAGGCTTACACCGAGAGATTAAGAAGCCTAATGCCCAATAAGCAACCATATCATTA A
Upstream 100 bases:
>100_bases TTACGATTTATTAATTAAATGAGAACCAATGATGCTGGGTTTAAAGGGTAATGATGTTGTACAATAAGCCTTATAAATGC CTTAATTCCTCAGCGTATTA
Downstream 100 bases:
>100_bases TGGATACGGTTTTAATTCATTAAGTGGTGTGTTTAATAAGGGGGAATAGTGCCTAAGCCTGTGCCCGTTAAGAAGACCCT TAATGCGCTTGACTTAGTGG
Product: chloride channel protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MNISELPYYVKWFILGIVIGVVAGLSALAFYFTLKFMEYLFMVRLIAFKPPLPIGEGGSLNYVLHAGRLWLIPVSTALGG LLSGLIVYTWAPEAEGHGTDAAINAFHRLQGRIRRRIPPIKLIASAITIGSGGSAGREGPTAQLSAGIGSFIADLLGLSA EDRRIAVAVGIGAGIGSIFKAPMGGAILAAEVLYKRDMETEVLFPALVASVVGYSIFSSIVGFTPIFGYYTGVFNPLRLP LYAVLGIVDGLVAVLYVKTFYFIHDSFKRWRISNYVKPVIGGLATGLIGLLVPEILGTGYGWVNLAEFNNVNAFASPVLI PPLMILILLPFLKIIATSFTVGSGGSGGVFAPGIVIGAFTGFDAWLLFHYLTPGLTPNPAPFVIVSMLALFGASAKAPLA VMFMVIEMTGSYQLLPAAMIAVAIAYIVSGDYTIYRAQVPTRRDSPAHANEYKVPLIMELKVKDCRIIKGPVVSPSDDAG KALNTMLRLRYTALPVVDDGRFIGLISIYNMNGGRGKVSDYIIRDTQYVTPESTLYDALTVMSKLGTTWVPVVSNGEFLG ILTMENMNKAYTERLRSLMPNKQPYH
Sequences:
>Translated_586_residues MNISELPYYVKWFILGIVIGVVAGLSALAFYFTLKFMEYLFMVRLIAFKPPLPIGEGGSLNYVLHAGRLWLIPVSTALGG LLSGLIVYTWAPEAEGHGTDAAINAFHRLQGRIRRRIPPIKLIASAITIGSGGSAGREGPTAQLSAGIGSFIADLLGLSA EDRRIAVAVGIGAGIGSIFKAPMGGAILAAEVLYKRDMETEVLFPALVASVVGYSIFSSIVGFTPIFGYYTGVFNPLRLP LYAVLGIVDGLVAVLYVKTFYFIHDSFKRWRISNYVKPVIGGLATGLIGLLVPEILGTGYGWVNLAEFNNVNAFASPVLI PPLMILILLPFLKIIATSFTVGSGGSGGVFAPGIVIGAFTGFDAWLLFHYLTPGLTPNPAPFVIVSMLALFGASAKAPLA VMFMVIEMTGSYQLLPAAMIAVAIAYIVSGDYTIYRAQVPTRRDSPAHANEYKVPLIMELKVKDCRIIKGPVVSPSDDAG KALNTMLRLRYTALPVVDDGRFIGLISIYNMNGGRGKVSDYIIRDTQYVTPESTLYDALTVMSKLGTTWVPVVSNGEFLG ILTMENMNKAYTERLRSLMPNKQPYH >Mature_586_residues MNISELPYYVKWFILGIVIGVVAGLSALAFYFTLKFMEYLFMVRLIAFKPPLPIGEGGSLNYVLHAGRLWLIPVSTALGG LLSGLIVYTWAPEAEGHGTDAAINAFHRLQGRIRRRIPPIKLIASAITIGSGGSAGREGPTAQLSAGIGSFIADLLGLSA EDRRIAVAVGIGAGIGSIFKAPMGGAILAAEVLYKRDMETEVLFPALVASVVGYSIFSSIVGFTPIFGYYTGVFNPLRLP LYAVLGIVDGLVAVLYVKTFYFIHDSFKRWRISNYVKPVIGGLATGLIGLLVPEILGTGYGWVNLAEFNNVNAFASPVLI PPLMILILLPFLKIIATSFTVGSGGSGGVFAPGIVIGAFTGFDAWLLFHYLTPGLTPNPAPFVIVSMLALFGASAKAPLA VMFMVIEMTGSYQLLPAAMIAVAIAYIVSGDYTIYRAQVPTRRDSPAHANEYKVPLIMELKVKDCRIIKGPVVSPSDDAG KALNTMLRLRYTALPVVDDGRFIGLISIYNMNGGRGKVSDYIIRDTQYVTPESTLYDALTVMSKLGTTWVPVVSNGEFLG ILTMENMNKAYTERLRSLMPNKQPYH
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=408, Percent_Identity=27.2058823529412, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI87081943, Length=338, Percent_Identity=28.9940828402367, Blast_Score=92, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 63159; Mature: 63159
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISELPYYVKWFILGIVIGVVAGLSALAFYFTLKFMEYLFMVRLIAFKPPLPIGEGGSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE NYVLHAGRLWLIPVSTALGGLLSGLIVYTWAPEAEGHGTDAAINAFHRLQGRIRRRIPPI EEEEECCEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHH KLIASAITIGSGGSAGREGPTAQLSAGIGSFIADLLGLSAEDRRIAVAVGIGAGIGSIFK HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH APMGGAILAAEVLYKRDMETEVLFPALVASVVGYSIFSSIVGFTPIFGYYTGVFNPLRLP CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LYAVLGIVDGLVAVLYVKTFYFIHDSFKRWRISNYVKPVIGGLATGLIGLLVPEILGTGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GWVNLAEFNNVNAFASPVLIPPLMILILLPFLKIIATSFTVGSGGSGGVFAPGIVIGAFT CEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHEEHHC GFDAWLLFHYLTPGLTPNPAPFVIVSMLALFGASAKAPLAVMFMVIEMTGSYQLLPAAMI CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH AVAIAYIVSGDYTIYRAQVPTRRDSPAHANEYKVPLIMELKVKDCRIIKGPVVSPSDDAG HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHH KALNTMLRLRYTALPVVDDGRFIGLISIYNMNGGRGKVSDYIIRDTQYVTPESTLYDALT HHHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCCCHHHEEEECCEECCCCHHHHHHHH VMSKLGTTWVPVVSNGEFLGILTMENMNKAYTERLRSLMPNKQPYH HHHHCCCCEEEEECCCCEEEEEEHHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNISELPYYVKWFILGIVIGVVAGLSALAFYFTLKFMEYLFMVRLIAFKPPLPIGEGGSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE NYVLHAGRLWLIPVSTALGGLLSGLIVYTWAPEAEGHGTDAAINAFHRLQGRIRRRIPPI EEEEECCEEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHH KLIASAITIGSGGSAGREGPTAQLSAGIGSFIADLLGLSAEDRRIAVAVGIGAGIGSIFK HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH APMGGAILAAEVLYKRDMETEVLFPALVASVVGYSIFSSIVGFTPIFGYYTGVFNPLRLP CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LYAVLGIVDGLVAVLYVKTFYFIHDSFKRWRISNYVKPVIGGLATGLIGLLVPEILGTGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GWVNLAEFNNVNAFASPVLIPPLMILILLPFLKIIATSFTVGSGGSGGVFAPGIVIGAFT CEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHEEHHC GFDAWLLFHYLTPGLTPNPAPFVIVSMLALFGASAKAPLAVMFMVIEMTGSYQLLPAAMI CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH AVAIAYIVSGDYTIYRAQVPTRRDSPAHANEYKVPLIMELKVKDCRIIKGPVVSPSDDAG HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCHHH KALNTMLRLRYTALPVVDDGRFIGLISIYNMNGGRGKVSDYIIRDTQYVTPESTLYDALT HHHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCCCHHHEEEECCEECCCCHHHHHHHH VMSKLGTTWVPVVSNGEFLGILTMENMNKAYTERLRSLMPNKQPYH HHHHCCCCEEEEECCCCEEEEEEHHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]