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The map label for this gene is 159040762

Identifier: 159040762

GI number: 159040762

Start: 207595

End: 209547

Strand: Reverse

Name: 159040762

Synonym: Cmaq_0175

Alternate gene names: NA

Gene position: 209547-207595 (Counterclockwise)

Preceding gene: 159040763

Following gene: 159040759

Centisome position: 10.09

GC content: 47.41

Gene sequence:

>1953_bases
GTGCCTAAGCCTGTGCCCGTTAAGAAGACCCTTAATGCGCTTGACTTAGTGGCCATAGCGGTTGAGCTTAACGCCACGTT
GAGTGGTGGGAGGTTGATTAGGGTTTATAGGCTTGGTGACTCGCATTACTTTAAGATTAGGGCATCTGATGTAGCCTACC
TTATCGCTAACCCAAGGAGGATTAGTCGAACCTGGAGGATACCTCAAGGCTTATCCCCCAGTCCCCTTAGGAGGTTTATT
GAGGACTGCGTGATAAATAGGTTTGAGGCTAACTTAGATAGGGTGATGAGTATTGACTTAAACTGCGGTAGACTCACCAT
TGAATTAATACCACCCTTCAACATGGTGTTCACTGTTGATGGTAAGGTTAAGTGGCTTCTACACGAGTACAGGGGTAAGG
ATAGGGAGGTTAAGGTTGGATCAACCTACATTGAACCCCCGAGGAGGTTCCTGGATCCAAGGTTCTTCGATAATCTACTT
AAGCTCATTGAGGATTCAGGCTTAAGTGATGAAGCCTTAGCTAAGGGTCTTGGGTTAGGTACTGATTGGGCCAGGGAGGT
TTGCACCAGGTCTGGGTGCAGTGACCCGGTTCTAGTATGGGGAAGTATTAGGGGTATTCTTGAGGTTCTTCACTTAGGTA
GGCTTAAGCCAGTCATATATGCTTCACCATCATACGTATCCCCCATACCCCTTAGCTCAATTAAGGGTGAGTTCAAGGAG
GTTGAGAGCTTCAATAAGGCTGTTGACGATTACTTCACCTCAATTGAGGTTGAGAGGGTTGCTGAGGAGAGGGTTAAGGG
TATTGAGGATGAGATTGCTAGGCTTGAGTCATCCATTAAGGAACTTGAGGACACCGTGGGTGGTTACTTAAGGGAGGCTG
AGAACCTTAGGAGGAGGGGTGAGTTAATCATGGGTAGGCTCTATGAGTTTAGTGAGCTTCATGAGGCGCTGCTGCGCGCC
TACATGGCTGATAAGGATTCCTTCAAGGCTAAGGTTAAGGGTATTGAGTATGGTGGCATTAAGGTGATTGATTATGATCC
ATTGAGGAAGACAGTGAAGGTTACGGTGAATAATAATGAGGTTGAGTTAACATTGGGGGAGAGTCCTGGGGAGACGGCGG
CCAAGTACTTTGAGGAGGCTAAGAGACTGGAGAAGAAGGCTAAGGCGGCTGAGGCTAAGTTAACGGAATTAAGGGGTAAG
GTGAATGAATTAAGGAGTAGGGTTAATGAAGCCACTGAGGAGACTAGGGCGGCAGTTAGATTCGTGGCCAGTAGGGAGTG
GTTTGAGAGGTTTAGGTGGTTCATAACCAGTGGTGGTTCACCGGTCCTAGCTGGTAAGGATGCTGGGCAGAATGAGGCCA
TTGTTAAGAGGTACATGAATCCATGGGACCTCTTTCTTCACGCTGATGTTCAAGGAGGCCCAGTGACGGTGATTAAGGTT
ACTAGGGGCCAGGAGGTTAAGCAACAGGACTTAATTGAGGCTGCTCAATACGCCGCAGCCTACTCCAAGGCTTGGAAGCT
TGGGGCTAATTCAATAGACGTCTACTACGTTAAGGGTGAGCAGGTTAGTAAGAAGGCGCCCAGTGGCGAGTACTTGTCTA
AGGGTGGATTCATGATATATGGACAGAGGGGGTGGGTTAGGGGTGTTGAGTTAATTATTAGTGTGGGTTTAAGGATTGAC
GGTGACGTGATTAGGCTAGTATCAGCACCACCAACAGCCATGGGTTCACTGGCGAATTACTACATTACCCTTAAGCCAGG
TAACAGTGAGAGGAGTGAGGTTGCTGGTAGGATTAGGGAATTATTCATTAAGAGGTATCCTGAGGCTAGGCAAATACCTG
TGGATCATATTATTGAGCATGTGCCAGGGCCATCAGTGGTAATTGAGTCTAATGAAGGTAACCCAATCACCTGGGATACT
GTTAAGGGGATTTTCAATAAGGTTGCTGGTTAA

Upstream 100 bases:

>100_bases
TTACACCGAGAGATTAAGAAGCCTAATGCCCAATAAGCAACCATATCATTAATGGATACGGTTTTAATTCATTAAGTGGT
GTGTTTAATAAGGGGGAATA

Downstream 100 bases:

>100_bases
GTTGATTTAAAGGGCCTAACTAATAGATCCCTATTCAACTCAACTCCAAAGCCAGGTTTCCTACTAAGCCTAACCTTACC
GTTCTGGGGAATAGGCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MPKPVPVKKTLNALDLVAIAVELNATLSGGRLIRVYRLGDSHYFKIRASDVAYLIANPRRISRTWRIPQGLSPSPLRRFI
EDCVINRFEANLDRVMSIDLNCGRLTIELIPPFNMVFTVDGKVKWLLHEYRGKDREVKVGSTYIEPPRRFLDPRFFDNLL
KLIEDSGLSDEALAKGLGLGTDWAREVCTRSGCSDPVLVWGSIRGILEVLHLGRLKPVIYASPSYVSPIPLSSIKGEFKE
VESFNKAVDDYFTSIEVERVAEERVKGIEDEIARLESSIKELEDTVGGYLREAENLRRRGELIMGRLYEFSELHEALLRA
YMADKDSFKAKVKGIEYGGIKVIDYDPLRKTVKVTVNNNEVELTLGESPGETAAKYFEEAKRLEKKAKAAEAKLTELRGK
VNELRSRVNEATEETRAAVRFVASREWFERFRWFITSGGSPVLAGKDAGQNEAIVKRYMNPWDLFLHADVQGGPVTVIKV
TRGQEVKQQDLIEAAQYAAAYSKAWKLGANSIDVYYVKGEQVSKKAPSGEYLSKGGFMIYGQRGWVRGVELIISVGLRID
GDVIRLVSAPPTAMGSLANYYITLKPGNSERSEVAGRIRELFIKRYPEARQIPVDHIIEHVPGPSVVIESNEGNPITWDT
VKGIFNKVAG

Sequences:

>Translated_650_residues
MPKPVPVKKTLNALDLVAIAVELNATLSGGRLIRVYRLGDSHYFKIRASDVAYLIANPRRISRTWRIPQGLSPSPLRRFI
EDCVINRFEANLDRVMSIDLNCGRLTIELIPPFNMVFTVDGKVKWLLHEYRGKDREVKVGSTYIEPPRRFLDPRFFDNLL
KLIEDSGLSDEALAKGLGLGTDWAREVCTRSGCSDPVLVWGSIRGILEVLHLGRLKPVIYASPSYVSPIPLSSIKGEFKE
VESFNKAVDDYFTSIEVERVAEERVKGIEDEIARLESSIKELEDTVGGYLREAENLRRRGELIMGRLYEFSELHEALLRA
YMADKDSFKAKVKGIEYGGIKVIDYDPLRKTVKVTVNNNEVELTLGESPGETAAKYFEEAKRLEKKAKAAEAKLTELRGK
VNELRSRVNEATEETRAAVRFVASREWFERFRWFITSGGSPVLAGKDAGQNEAIVKRYMNPWDLFLHADVQGGPVTVIKV
TRGQEVKQQDLIEAAQYAAAYSKAWKLGANSIDVYYVKGEQVSKKAPSGEYLSKGGFMIYGQRGWVRGVELIISVGLRID
GDVIRLVSAPPTAMGSLANYYITLKPGNSERSEVAGRIRELFIKRYPEARQIPVDHIIEHVPGPSVVIESNEGNPITWDT
VKGIFNKVAG
>Mature_649_residues
PKPVPVKKTLNALDLVAIAVELNATLSGGRLIRVYRLGDSHYFKIRASDVAYLIANPRRISRTWRIPQGLSPSPLRRFIE
DCVINRFEANLDRVMSIDLNCGRLTIELIPPFNMVFTVDGKVKWLLHEYRGKDREVKVGSTYIEPPRRFLDPRFFDNLLK
LIEDSGLSDEALAKGLGLGTDWAREVCTRSGCSDPVLVWGSIRGILEVLHLGRLKPVIYASPSYVSPIPLSSIKGEFKEV
ESFNKAVDDYFTSIEVERVAEERVKGIEDEIARLESSIKELEDTVGGYLREAENLRRRGELIMGRLYEFSELHEALLRAY
MADKDSFKAKVKGIEYGGIKVIDYDPLRKTVKVTVNNNEVELTLGESPGETAAKYFEEAKRLEKKAKAAEAKLTELRGKV
NELRSRVNEATEETRAAVRFVASREWFERFRWFITSGGSPVLAGKDAGQNEAIVKRYMNPWDLFLHADVQGGPVTVIKVT
RGQEVKQQDLIEAAQYAAAYSKAWKLGANSIDVYYVKGEQVSKKAPSGEYLSKGGFMIYGQRGWVRGVELIISVGLRIDG
DVIRLVSAPPTAMGSLANYYITLKPGNSERSEVAGRIRELFIKRYPEARQIPVDHIIEHVPGPSVVIESNEGNPITWDTV
KGIFNKVAG

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=190, Percent_Identity=35.7894736842105, Blast_Score=120, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI32565397, Length=363, Percent_Identity=29.7520661157025, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI281362530, Length=354, Percent_Identity=29.9435028248588, Blast_Score=135, Evalue=9e-32,
Organism=Drosophila melanogaster, GI281362528, Length=354, Percent_Identity=29.9435028248588, Blast_Score=135, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 72944; Mature: 72812

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPVPVKKTLNALDLVAIAVELNATLSGGRLIRVYRLGDSHYFKIRASDVAYLIANPRR
CCCCCCHHHHHHHHHHEEEEEEECCEECCCEEEEEEEECCCEEEEEEECCEEEEEECCHH
ISRTWRIPQGLSPSPLRRFIEDCVINRFEANLDRVMSIDLNCGRLTIELIPPFNMVFTVD
HHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCEEEEEEECCCCEEEEEC
GKVKWLLHEYRGKDREVKVGSTYIEPPRRFLDPRFFDNLLKLIEDSGLSDEALAKGLGLG
CCEEEHHHHHCCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCC
TDWAREVCTRSGCSDPVLVWGSIRGILEVLHLGRLKPVIYASPSYVSPIPLSSIKGEFKE
CHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH
VESFNKAVDDYFTSIEVERVAEERVKGIEDEIARLESSIKELEDTVGGYLREAENLRRRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELIMGRLYEFSELHEALLRAYMADKDSFKAKVKGIEYGGIKVIDYDPLRKTVKVTVNNNE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECEEEECCEEEEECCCCCEEEEEEEECCE
VELTLGESPGETAAKYFEEAKRLEKKAKAAEAKLTELRGKVNELRSRVNEATEETRAAVR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVASREWFERFRWFITSGGSPVLAGKDAGQNEAIVKRYMNPWDLFLHADVQGGPVTVIKV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEE
TRGQEVKQQDLIEAAQYAAAYSKAWKLGANSIDVYYVKGEQVSKKAPSGEYLSKGGFMIY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCEEEE
GQRGWVRGVELIISVGLRIDGDVIRLVSAPPTAMGSLANYYITLKPGNSERSEVAGRIRE
ECCCHHHHHHHHHHHCCEECCCEEEEECCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHH
LFIKRYPEARQIPVDHIIEHVPGPSVVIESNEGNPITWDTVKGIFNKVAG
HHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure 
PKPVPVKKTLNALDLVAIAVELNATLSGGRLIRVYRLGDSHYFKIRASDVAYLIANPRR
CCCCCHHHHHHHHHHEEEEEEECCEECCCEEEEEEEECCCEEEEEEECCEEEEEECCHH
ISRTWRIPQGLSPSPLRRFIEDCVINRFEANLDRVMSIDLNCGRLTIELIPPFNMVFTVD
HHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCEEEEEEECCCCEEEEEC
GKVKWLLHEYRGKDREVKVGSTYIEPPRRFLDPRFFDNLLKLIEDSGLSDEALAKGLGLG
CCEEEHHHHHCCCCCEEEECCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCCC
TDWAREVCTRSGCSDPVLVWGSIRGILEVLHLGRLKPVIYASPSYVSPIPLSSIKGEFKE
CHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH
VESFNKAVDDYFTSIEVERVAEERVKGIEDEIARLESSIKELEDTVGGYLREAENLRRRG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELIMGRLYEFSELHEALLRAYMADKDSFKAKVKGIEYGGIKVIDYDPLRKTVKVTVNNNE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECEEEECCEEEEECCCCCEEEEEEEECCE
VELTLGESPGETAAKYFEEAKRLEKKAKAAEAKLTELRGKVNELRSRVNEATEETRAAVR
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVASREWFERFRWFITSGGSPVLAGKDAGQNEAIVKRYMNPWDLFLHADVQGGPVTVIKV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEE
TRGQEVKQQDLIEAAQYAAAYSKAWKLGANSIDVYYVKGEQVSKKAPSGEYLSKGGFMIY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCEEEE
GQRGWVRGVELIISVGLRIDGDVIRLVSAPPTAMGSLANYYITLKPGNSERSEVAGRIRE
ECCCHHHHHHHHHHHCCEECCCEEEEECCCCHHHCCCEEEEEEEECCCCHHHHHHHHHHH
LFIKRYPEARQIPVDHIIEHVPGPSVVIESNEGNPITWDTVKGIFNKVAG
HHHHHCCCCCCCCHHHHHHHCCCCCEEEECCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]