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The map label for this gene is 159040747

Identifier: 159040747

GI number: 159040747

Start: 186524

End: 187747

Strand: Reverse

Name: 159040747

Synonym: Cmaq_0160

Alternate gene names: NA

Gene position: 187747-186524 (Counterclockwise)

Preceding gene: 159040748

Following gene: 159040746

Centisome position: 9.04

GC content: 42.4

Gene sequence:

>1224_bases
ATGATTACTTGGGTTGGGATTGATGACACTGACACATATGATAAGGGATGCACAACGTATGTAATGTATAATATGCTTAA
GGAGTTCCTTAAAACTAAGGGTGAATGGAGAATAATCACATACCCCCGGTTAATTAGGCTTAACCCAAACGTACCCTTTA
AGACTAGGGGGAACGCTGCGGTTTCAGTAGGCCTTAATGTTGATGATCCAAGGGAAGCATTAGAGCTAGCTGAGTGGGCT
GTGGATGCGTACTCACATAAGATTGGTAAAACTAGCCCAGGCATAGTGGTTTCAATAAGTAATAATGAGCATTGGATATA
TTGGAAGGCCTTAAGTGATGTAATTCCCCTTAATGCAGCGGTTAAATGGATGAGTAAGCTAGGTGTAATTTACAGGGGTG
GTAGAGGGGTTATTGGAGCCTTAGCCTCAGTAATGGCTGACTTAAGCCAAGACTCAACCCTAGAGCTACTGGCCTACAGT
GAATCAACCCCAAAGCCGAGCATACCCATTGATCTTGTTAAGAAGCTGAATGATTCAACAACTCCATTAACCTTCGAGAA
CGTGAGCGGTGACTATGTTTTAATACAGCCTCATGGAAACGACCCAGTGATATTTGGGATTAGGGGTGATTCACCATACC
ACATTATTCACTTCGCATCAATGCTTATTAATGAAGTGGATGTTGAGCCAAGGTGGTTAATCTACTTAACAAACCAAGCC
ACTGGCCATCATCTTAACAGCATCATGAATAAACCATACACCACTGGTTACGTTGAGGGTTCAGTAAATGAAGTGAGGCT
AGTGCAGGGTGGTAACATTGAGATCAGGGTTAATTCAACACATGTCTTCTCATATAGGCACTATGGGTTTAAGAGCATTG
ATAAGGCCACTTACCTAATAGCCTACGGTGGATTTAAACCAGGAGTGAATAGTCTAGACTTATACATGGAGGGTGGTGTT
GCATTAATGCTTAATAATATTGTTAAGAATCCAAGATGCCCAAGGTGTGGTAGTAACCTTGAATCCACAGGTAGGGTTGG
GTTACTTAAATGCCCTAAATGCGGATTAATTACCGGGTTACCTAGGCTAATGAACTACACCAGTGAGTTTACCCTGGAGG
AGCCAAGGGAGGCTGAGGTTAGGCACCTTCATAAGCCCACTGCTAGAATAGGCCTTGAGGGTTTAGTTAATGTGTTTAAT
AGGCCTTCCTTATGGATAATTTAA

Upstream 100 bases:

>100_bases
GTAATACCAGTTCAATAATCCTGCATTAACGCGCATTTAATTCATTAGCCACGTTAAGTTAATAATTAAGTACCCTAAAT
GAACCACTGGTAGTTGATTA

Downstream 100 bases:

>100_bases
AAACTACCCATTGAGGGTTAACTGTGGCTGAGGAAACAAGGGTGATAACATTTGATGTGTATCAGACGGTGCTTGAGTAT
GGGGATGCGTTGATTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MITWVGIDDTDTYDKGCTTYVMYNMLKEFLKTKGEWRIITYPRLIRLNPNVPFKTRGNAAVSVGLNVDDPREALELAEWA
VDAYSHKIGKTSPGIVVSISNNEHWIYWKALSDVIPLNAAVKWMSKLGVIYRGGRGVIGALASVMADLSQDSTLELLAYS
ESTPKPSIPIDLVKKLNDSTTPLTFENVSGDYVLIQPHGNDPVIFGIRGDSPYHIIHFASMLINEVDVEPRWLIYLTNQA
TGHHLNSIMNKPYTTGYVEGSVNEVRLVQGGNIEIRVNSTHVFSYRHYGFKSIDKATYLIAYGGFKPGVNSLDLYMEGGV
ALMLNNIVKNPRCPRCGSNLESTGRVGLLKCPKCGLITGLPRLMNYTSEFTLEEPREAEVRHLHKPTARIGLEGLVNVFN
RPSLWII

Sequences:

>Translated_407_residues
MITWVGIDDTDTYDKGCTTYVMYNMLKEFLKTKGEWRIITYPRLIRLNPNVPFKTRGNAAVSVGLNVDDPREALELAEWA
VDAYSHKIGKTSPGIVVSISNNEHWIYWKALSDVIPLNAAVKWMSKLGVIYRGGRGVIGALASVMADLSQDSTLELLAYS
ESTPKPSIPIDLVKKLNDSTTPLTFENVSGDYVLIQPHGNDPVIFGIRGDSPYHIIHFASMLINEVDVEPRWLIYLTNQA
TGHHLNSIMNKPYTTGYVEGSVNEVRLVQGGNIEIRVNSTHVFSYRHYGFKSIDKATYLIAYGGFKPGVNSLDLYMEGGV
ALMLNNIVKNPRCPRCGSNLESTGRVGLLKCPKCGLITGLPRLMNYTSEFTLEEPREAEVRHLHKPTARIGLEGLVNVFN
RPSLWII
>Mature_407_residues
MITWVGIDDTDTYDKGCTTYVMYNMLKEFLKTKGEWRIITYPRLIRLNPNVPFKTRGNAAVSVGLNVDDPREALELAEWA
VDAYSHKIGKTSPGIVVSISNNEHWIYWKALSDVIPLNAAVKWMSKLGVIYRGGRGVIGALASVMADLSQDSTLELLAYS
ESTPKPSIPIDLVKKLNDSTTPLTFENVSGDYVLIQPHGNDPVIFGIRGDSPYHIIHFASMLINEVDVEPRWLIYLTNQA
TGHHLNSIMNKPYTTGYVEGSVNEVRLVQGGNIEIRVNSTHVFSYRHYGFKSIDKATYLIAYGGFKPGVNSLDLYMEGGV
ALMLNNIVKNPRCPRCGSNLESTGRVGLLKCPKCGLITGLPRLMNYTSEFTLEEPREAEVRHLHKPTARIGLEGLVNVFN
RPSLWII

Specific function: Unknown

COG id: COG1571

COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013696
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF08489 DUF1743; PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 45403; Mature: 45403

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITWVGIDDTDTYDKGCTTYVMYNMLKEFLKTKGEWRIITYPRLIRLNPNVPFKTRGNAA
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEECCCEE
VSVGLNVDDPREALELAEWAVDAYSHKIGKTSPGIVVSISNNEHWIYWKALSDVIPLNAA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH
VKWMSKLGVIYRGGRGVIGALASVMADLSQDSTLELLAYSESTPKPSIPIDLVKKLNDST
HHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCC
TPLTFENVSGDYVLIQPHGNDPVIFGIRGDSPYHIIHFASMLINEVDVEPRWLIYLTNQA
CCEEEECCCCCEEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC
TGHHLNSIMNKPYTTGYVEGSVNEVRLVQGGNIEIRVNSTHVFSYRHYGFKSIDKATYLI
CCHHHHHHHCCCCCCEEEECCCCEEEEEECCEEEEEEECEEEEEEECCCCCCCCCEEEEE
AYGGFKPGVNSLDLYMEGGVALMLNNIVKNPRCPRCGSNLESTGRVGLLKCPKCGLITGL
EECCCCCCCCCEEEEECCCHHHEEHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCC
PRLMNYTSEFTLEEPREAEVRHLHKPTARIGLEGLVNVFNRPSLWII
HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHCCCCEEEC
>Mature Secondary Structure
MITWVGIDDTDTYDKGCTTYVMYNMLKEFLKTKGEWRIITYPRLIRLNPNVPFKTRGNAA
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEECCCEE
VSVGLNVDDPREALELAEWAVDAYSHKIGKTSPGIVVSISNNEHWIYWKALSDVIPLNAA
EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHH
VKWMSKLGVIYRGGRGVIGALASVMADLSQDSTLELLAYSESTPKPSIPIDLVKKLNDST
HHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCC
TPLTFENVSGDYVLIQPHGNDPVIFGIRGDSPYHIIHFASMLINEVDVEPRWLIYLTNQA
CCEEEECCCCCEEEEEECCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC
TGHHLNSIMNKPYTTGYVEGSVNEVRLVQGGNIEIRVNSTHVFSYRHYGFKSIDKATYLI
CCHHHHHHHCCCCCCEEEECCCCEEEEEECCEEEEEEECEEEEEEECCCCCCCCCEEEEE
AYGGFKPGVNSLDLYMEGGVALMLNNIVKNPRCPRCGSNLESTGRVGLLKCPKCGLITGL
EECCCCCCCCCEEEEECCCHHHEEHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCC
PRLMNYTSEFTLEEPREAEVRHLHKPTARIGLEGLVNVFNRPSLWII
HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]