| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040631
Identifier: 159040631
GI number: 159040631
Start: 54649
End: 54909
Strand: Reverse
Name: 159040631
Synonym: Cmaq_0039
Alternate gene names: NA
Gene position: 54909-54649 (Counterclockwise)
Preceding gene: 159040632
Following gene: 159040630
Centisome position: 2.64
GC content: 42.91
Gene sequence:
>261_bases ATGACCAAGCAGAGAAGGGTAGATTGCGTATACTTGCTTAAACTAGTGAAACTACTTGAGGACCCATTCTCGGGCTACTA CAGTGATGGGTACTTAAATAGTGAGGGTATGACTATACTAAGCCTAATCGCCCAATTAACTATACGTGAAGCCCCCTGGT CAGCATCACTGTTTAGGAAGGCTAGGGAGAGGAAAGATTACCAATCAGTTGTGAAGATACTGGAGGGTATTAGGGAATTA TGCCCAGGTAGTGAATATTAA
Upstream 100 bases:
>100_bases TCAGCCAAGACAGGGTTAAGAATGCATTAGAAAGATTAAGAAAAAGCATGGGTAAGGCTAAGGGATCCACGACCCTCGAC TCATTCTTCGGTTGATTAAA
Downstream 100 bases:
>100_bases TTAACGCCTTAATGCCTTAACGTTACTCAAGTAGACCCTAAATAAGTCACCATTACTCCGCATAGCCAATAGTGAAATCA CAACCACTAGCACTAGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTKQRRVDCVYLLKLVKLLEDPFSGYYSDGYLNSEGMTILSLIAQLTIREAPWSASLFRKARERKDYQSVVKILEGIREL CPGSEY
Sequences:
>Translated_86_residues MTKQRRVDCVYLLKLVKLLEDPFSGYYSDGYLNSEGMTILSLIAQLTIREAPWSASLFRKARERKDYQSVVKILEGIREL CPGSEY >Mature_85_residues TKQRRVDCVYLLKLVKLLEDPFSGYYSDGYLNSEGMTILSLIAQLTIREAPWSASLFRKARERKDYQSVVKILEGIRELC PGSEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9952; Mature: 9820
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQRRVDCVYLLKLVKLLEDPFSGYYSDGYLNSEGMTILSLIAQLTIREAPWSASLFRK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHH ARERKDYQSVVKILEGIRELCPGSEY HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TKQRRVDCVYLLKLVKLLEDPFSGYYSDGYLNSEGMTILSLIAQLTIREAPWSASLFRK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHH ARERKDYQSVVKILEGIRELCPGSEY HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA